Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--2350
(654 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81140-4|CAJ55247.1| 463|Caenorhabditis elegans Hypothetical pr... 30 1.6
Z81140-3|CAJ55246.1| 453|Caenorhabditis elegans Hypothetical pr... 30 1.6
Z83125-9|CAB05624.1| 338|Caenorhabditis elegans Hypothetical pr... 29 2.9
Z81489-11|CAJ30223.1| 323|Caenorhabditis elegans Hypothetical p... 29 3.8
Z78546-3|CAB01768.2| 361|Caenorhabditis elegans Hypothetical pr... 29 3.8
Z81468-4|CAB03877.1| 394|Caenorhabditis elegans Hypothetical pr... 28 6.7
Z69716-5|CAA93524.1| 231|Caenorhabditis elegans Hypothetical pr... 28 6.7
AL021181-1|CAA15983.1| 394|Caenorhabditis elegans Hypothetical ... 28 6.7
Z71177-4|CAA94870.1| 529|Caenorhabditis elegans Hypothetical pr... 27 8.8
AL132872-2|CAB60761.2| 119|Caenorhabditis elegans Hypothetical ... 27 8.8
>Z81140-4|CAJ55247.1| 463|Caenorhabditis elegans Hypothetical
protein W10G6.2b protein.
Length = 463
Score = 29.9 bits (64), Expect = 1.6
Identities = 18/54 (33%), Positives = 32/54 (59%)
Frame = +1
Query: 115 SR*NIRLKRYKTKHVLKPKNILINNVEVNTVV*FKYKIMLIKKKDYTFINHIVG 276
S+ +IR K+ + KHV+ +N+LINN + +V + K+K Y ++H+ G
Sbjct: 167 SKEHIR-KKNEVKHVMAERNVLINNFKHPFLVSLHFSFQ-NKEKLYFVLDHLNG 218
>Z81140-3|CAJ55246.1| 453|Caenorhabditis elegans Hypothetical
protein W10G6.2a protein.
Length = 453
Score = 29.9 bits (64), Expect = 1.6
Identities = 18/54 (33%), Positives = 32/54 (59%)
Frame = +1
Query: 115 SR*NIRLKRYKTKHVLKPKNILINNVEVNTVV*FKYKIMLIKKKDYTFINHIVG 276
S+ +IR K+ + KHV+ +N+LINN + +V + K+K Y ++H+ G
Sbjct: 157 SKEHIR-KKNEVKHVMAERNVLINNFKHPFLVSLHFSFQ-NKEKLYFVLDHLNG 208
>Z83125-9|CAB05624.1| 338|Caenorhabditis elegans Hypothetical
protein T15D6.11 protein.
Length = 338
Score = 29.1 bits (62), Expect = 2.9
Identities = 13/50 (26%), Positives = 23/50 (46%)
Frame = -1
Query: 309 VTPYYLSFDYCTYYMIDKCIILFFNQHDFVFKLHYSIDFHVIY*DVFRFK 160
+ PY F YM+ CI+ F + F + H I + + + ++FK
Sbjct: 3 IVPYNAFFPKMKLYMVSSCIVFGFVLYTFAPRFHTKIVWDTLDGEGYQFK 52
>Z81489-11|CAJ30223.1| 323|Caenorhabditis elegans Hypothetical
protein C55A1.14 protein.
Length = 323
Score = 28.7 bits (61), Expect = 3.8
Identities = 24/72 (33%), Positives = 38/72 (52%), Gaps = 4/72 (5%)
Frame = -1
Query: 348 LLVTIIRVNIFFIVTPYYLSFDYCTYYMIDKCIILF--FNQHDFVFKLHYSIDFHVIY*D 175
LLV+ + + ++ ++ P+Y + YM DK +LF N + K+ Y I F ++
Sbjct: 20 LLVSAVLIFVYSVILPFYFYVNKIN-YMKDKTTLLFPITNHFCVMIKMAYMI-FVILICR 77
Query: 174 VFR-FK-NMLSF 145
VF FK N LSF
Sbjct: 78 VFPCFKINTLSF 89
>Z78546-3|CAB01768.2| 361|Caenorhabditis elegans Hypothetical
protein T21H8.2 protein.
Length = 361
Score = 28.7 bits (61), Expect = 3.8
Identities = 11/33 (33%), Positives = 18/33 (54%)
Frame = -1
Query: 318 FFIVTPYYLSFDYCTYYMIDKCIILFFNQHDFV 220
FF+ Y+ F + YY I+ I++F N F+
Sbjct: 39 FFVFVYIYIRFSFRIYYHINAKILIFLNMMSFL 71
>Z81468-4|CAB03877.1| 394|Caenorhabditis elegans Hypothetical
protein Y54G11B.1 protein.
Length = 394
Score = 27.9 bits (59), Expect = 6.7
Identities = 18/61 (29%), Positives = 34/61 (55%), Gaps = 5/61 (8%)
Frame = -2
Query: 335 SFV*IFFLSLHLIISHSTIAPTI*LINV*SFFLISMIL-----YLNYTTVLTSTLFIKMF 171
S+ FL H ++S + A T+ L+ + +F +S + +L++T LTS +FI +F
Sbjct: 101 SYFWALFLKCHAMLSIALHAITLYLVVLMAFIRLSAMKLTTSRWLDHTRALTSAIFIALF 160
Query: 170 L 168
+
Sbjct: 161 V 161
>Z69716-5|CAA93524.1| 231|Caenorhabditis elegans Hypothetical
protein C04B4.5 protein.
Length = 231
Score = 27.9 bits (59), Expect = 6.7
Identities = 14/52 (26%), Positives = 25/52 (48%)
Frame = -1
Query: 366 FILYYYLLVTIIRVNIFFIVTPYYLSFDYCTYYMIDKCIILFFNQHDFVFKL 211
F L+ L I+ F+ + S ++CT + C + FF++ DF +L
Sbjct: 168 FSLFQTLFADIVEFGSSFVSLSSFNS-EHCTISIFQSCSLKFFSESDFWSRL 218
>AL021181-1|CAA15983.1| 394|Caenorhabditis elegans Hypothetical
protein Y54G11B.1 protein.
Length = 394
Score = 27.9 bits (59), Expect = 6.7
Identities = 18/61 (29%), Positives = 34/61 (55%), Gaps = 5/61 (8%)
Frame = -2
Query: 335 SFV*IFFLSLHLIISHSTIAPTI*LINV*SFFLISMIL-----YLNYTTVLTSTLFIKMF 171
S+ FL H ++S + A T+ L+ + +F +S + +L++T LTS +FI +F
Sbjct: 101 SYFWALFLKCHAMLSIALHAITLYLVVLMAFIRLSAMKLTTSRWLDHTRALTSAIFIALF 160
Query: 170 L 168
+
Sbjct: 161 V 161
>Z71177-4|CAA94870.1| 529|Caenorhabditis elegans Hypothetical
protein AC3.7 protein.
Length = 529
Score = 27.5 bits (58), Expect = 8.8
Identities = 15/49 (30%), Positives = 28/49 (57%)
Frame = -1
Query: 303 PYYLSFDYCTYYMIDKCIILFFNQHDFVFKLHYSIDFHVIY*DVFRFKN 157
PY + +++ YYM+D I+ F+ +F L + + F +Y VF+ K+
Sbjct: 480 PYNVHYNFVQYYMLDAFAII-FSILIIIFYLAHLL-FKFVYKHVFKTKS 526
>AL132872-2|CAB60761.2| 119|Caenorhabditis elegans Hypothetical
protein Y116F11A.3 protein.
Length = 119
Score = 27.5 bits (58), Expect = 8.8
Identities = 9/42 (21%), Positives = 22/42 (52%)
Frame = -1
Query: 312 IVTPYYLSFDYCTYYMIDKCIILFFNQHDFVFKLHYSIDFHV 187
+V+ Y +Y + +D C+ F ++++Y+I+F +
Sbjct: 54 LVSKYNFCPNYAPGWQLDSCVAFLDYTFSFFYRIYYAINFPI 95
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,576,887
Number of Sequences: 27780
Number of extensions: 272687
Number of successful extensions: 622
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 612
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 622
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1455289764
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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