Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--2347
(615 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 237 5e-63
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 237 5e-63
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 237 5e-63
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 237 5e-63
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 237 5e-63
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 237 5e-63
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 237 5e-63
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 237 5e-63
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 237 5e-63
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 231 3e-61
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 226 8e-60
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 124 5e-29
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 107 6e-24
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 96 2e-20
U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical pr... 84 9e-17
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 78 6e-15
Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical pr... 60 2e-09
U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related p... 60 2e-09
U42436-1|AAF99891.1| 305|Caenorhabditis elegans Hypothetical pr... 48 7e-06
U40426-4|AAP40527.1| 144|Caenorhabditis elegans Diacylglycerol ... 31 0.49
U40426-3|AAP40528.1| 351|Caenorhabditis elegans Diacylglycerol ... 31 0.49
U40426-2|AAP40526.1| 536|Caenorhabditis elegans Diacylglycerol ... 31 0.49
Z73907-1|CAA98124.1| 4753|Caenorhabditis elegans Hypothetical pr... 28 6.1
U28741-1|AAA68325.2| 256|Caenorhabditis elegans Hypothetical pr... 28 6.1
M96150-1|AAA28105.1| 4753|Caenorhabditis elegans LDL receptor-re... 28 6.1
AL032654-9|CAA21720.1| 404|Caenorhabditis elegans Hypothetical ... 28 6.1
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 237 bits (580), Expect = 5e-63
Identities = 109/114 (95%), Positives = 113/114 (99%)
Frame = -3
Query: 613 FQPSFLGMKACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALA 434
FQPSFLGM++ GIHET+YNSIMKCD+DIRKDLYANTVLSGGTTMYPGIADRMQKEITALA
Sbjct: 263 FQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALA 322
Query: 433 PSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 272
PSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 323 PSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 237 bits (580), Expect = 5e-63
Identities = 109/114 (95%), Positives = 113/114 (99%)
Frame = -3
Query: 613 FQPSFLGMKACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALA 434
FQPSFLGM++ GIHET+YNSIMKCD+DIRKDLYANTVLSGGTTMYPGIADRMQKEITALA
Sbjct: 263 FQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALA 322
Query: 433 PSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 272
PSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 323 PSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 237 bits (580), Expect = 5e-63
Identities = 109/114 (95%), Positives = 113/114 (99%)
Frame = -3
Query: 613 FQPSFLGMKACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALA 434
FQPSFLGM++ GIHET+YNSIMKCD+DIRKDLYANTVLSGGTTMYPGIADRMQKEITALA
Sbjct: 263 FQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALA 322
Query: 433 PSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 272
PSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 323 PSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 237 bits (580), Expect = 5e-63
Identities = 109/114 (95%), Positives = 113/114 (99%)
Frame = -3
Query: 613 FQPSFLGMKACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALA 434
FQPSFLGM++ GIHET+YNSIMKCD+DIRKDLYANTVLSGGTTMYPGIADRMQKEITALA
Sbjct: 263 FQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALA 322
Query: 433 PSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 272
PSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 323 PSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 237 bits (580), Expect = 5e-63
Identities = 109/114 (95%), Positives = 113/114 (99%)
Frame = -3
Query: 613 FQPSFLGMKACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALA 434
FQPSFLGM++ GIHET+YNSIMKCD+DIRKDLYANTVLSGGTTMYPGIADRMQKEITALA
Sbjct: 263 FQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALA 322
Query: 433 PSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 272
PSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 323 PSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 237 bits (580), Expect = 5e-63
Identities = 109/114 (95%), Positives = 113/114 (99%)
Frame = -3
Query: 613 FQPSFLGMKACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALA 434
FQPSFLGM++ GIHET+YNSIMKCD+DIRKDLYANTVLSGGTTMYPGIADRMQKEITALA
Sbjct: 263 FQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALA 322
Query: 433 PSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 272
PSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 323 PSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 237 bits (580), Expect = 5e-63
Identities = 109/114 (95%), Positives = 113/114 (99%)
Frame = -3
Query: 613 FQPSFLGMKACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALA 434
FQPSFLGM++ GIHET+YNSIMKCD+DIRKDLYANTVLSGGTTMYPGIADRMQKEITALA
Sbjct: 219 FQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALA 278
Query: 433 PSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 272
PSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 279 PSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 332
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 237 bits (580), Expect = 5e-63
Identities = 109/114 (95%), Positives = 113/114 (99%)
Frame = -3
Query: 613 FQPSFLGMKACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALA 434
FQPSFLGM++ GIHET+YNSIMKCD+DIRKDLYANTVLSGGTTMYPGIADRMQKEITALA
Sbjct: 249 FQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALA 308
Query: 433 PSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 272
PSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 309 PSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 362
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 237 bits (580), Expect = 5e-63
Identities = 109/114 (95%), Positives = 113/114 (99%)
Frame = -3
Query: 613 FQPSFLGMKACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALA 434
FQPSFLGM++ GIHET+YNSIMKCD+DIRKDLYANTVLSGGTTMYPGIADRMQKEITALA
Sbjct: 263 FQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALA 322
Query: 433 PSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 272
PSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 323 PSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 231 bits (565), Expect = 3e-61
Identities = 108/114 (94%), Positives = 112/114 (98%)
Frame = -3
Query: 613 FQPSFLGMKACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALA 434
FQPSFLGM++ GIHET+YNSIMKCD+DIRKDLYANTVLSGGTTMYPGIADRMQKEITALA
Sbjct: 263 FQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALA 322
Query: 433 PSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 272
P TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 323 P-TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 375
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 226 bits (553), Expect = 8e-60
Identities = 104/114 (91%), Positives = 109/114 (95%)
Frame = -3
Query: 613 FQPSFLGMKACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALA 434
FQP+F+GM+ GIHETTY SIMKCDVDIRKDLYANTVLSGGT+M+PGIADRMQKEI LA
Sbjct: 262 FQPAFIGMEGAGIHETTYQSIMKCDVDIRKDLYANTVLSGGTSMFPGIADRMQKEIQHLA 321
Query: 433 PSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 272
PSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 322 PSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 375
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 124 bits (299), Expect = 5e-29
Identities = 55/114 (48%), Positives = 79/114 (69%)
Frame = -3
Query: 613 FQPSFLGMKACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALA 434
F+P +G + G+ SIMKCDVD+R+ LY+N VLSGGTT++ G DR+ E+ +A
Sbjct: 261 FKPDLIGTEWPGMAHVVNQSIMKCDVDLRQTLYSNIVLSGGTTLFKGFGDRLLGEMRKIA 320
Query: 433 PSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 272
P+ KI+I A ER WIGGSI+ASL TF++MW+ K+EY++ G S +H++ F
Sbjct: 321 PADGKIRISASQERNSLTWIGGSIVASLDTFRKMWLGKKEYEDMGASAMHKRFF 374
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 107 bits (257), Expect = 6e-24
Identities = 47/92 (51%), Positives = 63/92 (68%), Gaps = 3/92 (3%)
Frame = -3
Query: 541 DVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPP---ERKYSVWIG 371
D+DIR L++N ++GG ++ G +R+ + P T+K+++ A P ERKY WIG
Sbjct: 344 DIDIRPTLFSNVTVTGGNSLILGFTERLNYALATKCPPTIKLRVFAAPTQAERKYGAWIG 403
Query: 370 GSILASLSTFQQMWISKQEYDESGPSIVHRKC 275
GSIL SL TFQQMW+SK EYDESG SIV +KC
Sbjct: 404 GSILGSLGTFQQMWVSKAEYDESGKSIVEKKC 435
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 95.9 bits (228), Expect = 2e-20
Identities = 49/118 (41%), Positives = 70/118 (59%), Gaps = 13/118 (11%)
Frame = -3
Query: 613 FQPSFLGMKACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITAL- 437
FQP + ++ G+ E + I D+D R D Y + VLSGGTTMYPG+ R++KE+ L
Sbjct: 266 FQPHLINVEKAGLSELLFGCIQASDIDTRLDFYKHIVLSGGTTMYPGLPSRLEKELKQLY 325
Query: 436 ----------APSTMKIKIIAPPERKYSVWIGGSILASL--STFQQMWISKQEYDESG 299
A KI+I APP RK+ V++GG++LA+L Q W+SK+EY+E G
Sbjct: 326 LDRVLHGNTDAFQKFKIRIEAPPSRKHMVFLGGAVLANLMKDRDQDFWVSKKEYEEGG 383
>U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical
protein F42C5.9 protein.
Length = 552
Score = 83.8 bits (198), Expect = 9e-17
Identities = 34/100 (34%), Positives = 65/100 (65%)
Frame = -3
Query: 613 FQPSFLGMKACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALA 434
F+P G+ G+H+ + +I++C +D R+ LY N L+GG ++ PGIA+++++E++ +
Sbjct: 440 FKPKKWGLDTKGLHQLIHEAILQCPIDSRRTLYRNIYLAGGASLMPGIAEKLEQELSTVV 499
Query: 433 PSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE 314
P+T+ ++ P R + ++G I+AS STF+ IS Q+
Sbjct: 500 PNTIHTQVNISPWRYNAAYLGAQIVASASTFEDSCISLQQ 539
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 77.8 bits (183), Expect = 6e-15
Identities = 44/125 (35%), Positives = 69/125 (55%), Gaps = 17/125 (13%)
Frame = -3
Query: 613 FQPSFLGMK-ACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITAL 437
F P F + I +T I +C +D+R+ LY N VLSGG+TM+ A ++Q+++ L
Sbjct: 290 FHPEFCNPEFTTPISDTIDTLIQQCPIDVRRGLYENIVLSGGSTMFKDFARKLQRDVKRL 349
Query: 436 A----------------PSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDE 305
+ P + +++I+ ++Y+VW GGS+LAS S F Q+ +K EY E
Sbjct: 350 SDGRLQMSETLSGGRLKPKPIDVQVISHKMQRYAVWFGGSMLASTSEFYQVSHTKAEYME 409
Query: 304 SGPSI 290
GPSI
Sbjct: 410 RGPSI 414
>Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical
protein C08B11.6 protein.
Length = 418
Score = 59.7 bits (138), Expect = 2e-09
Identities = 32/119 (26%), Positives = 62/119 (52%), Gaps = 3/119 (2%)
Frame = -3
Query: 613 FQPSFLGMKACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALA 434
F PS + + CG+ E SI +C +R L N ++ GG++ +PG +R+++E+ ++
Sbjct: 277 FNPSDIDIDQCGVAEAVIESICQCPEALRPALAENIIVIGGSSCFPGFRERLEREVRSML 336
Query: 433 PSTMKIKI---IAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF*T 266
P+ + + + P+ W G L L+ + WI+++++DE G S+ F T
Sbjct: 337 PAEYGLNVSNDVINPQT--HSWHCGQEL--LTASKVPWINRKDWDERGDSLEFSNFFQT 391
>U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related
protein-like protein.
Length = 418
Score = 59.7 bits (138), Expect = 2e-09
Identities = 32/119 (26%), Positives = 62/119 (52%), Gaps = 3/119 (2%)
Frame = -3
Query: 613 FQPSFLGMKACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALA 434
F PS + + CG+ E SI +C +R L N ++ GG++ +PG +R+++E+ ++
Sbjct: 277 FNPSDIDIDQCGVAEAVIESICQCPEALRPALAENIIVIGGSSCFPGFRERLEREVRSML 336
Query: 433 PSTMKIKI---IAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF*T 266
P+ + + + P+ W G L L+ + WI+++++DE G S+ F T
Sbjct: 337 PAEYGLNVSNDVINPQT--HSWHCGQEL--LTASKVPWINRKDWDERGDSLEFSNFFQT 391
>U42436-1|AAF99891.1| 305|Caenorhabditis elegans Hypothetical
protein C49H3.8 protein.
Length = 305
Score = 47.6 bits (108), Expect = 7e-06
Identities = 28/91 (30%), Positives = 51/91 (56%), Gaps = 10/91 (10%)
Frame = -3
Query: 553 IMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITAL-APSTMKIKIIAP----PERK 389
+ KC +D+RK L+ N +L+GG + PG+ R+++EI + + KI +I E K
Sbjct: 198 VSKCPIDLRKKLFPNILLTGGVSTIPGLMKRLEQEIQVIDEKNNSKIAVIVKFYQFSEIK 257
Query: 388 ----YSVWIGGSILASL-STFQQMWISKQEY 311
+ W+G S+L SL T ++ ++ +E+
Sbjct: 258 NTPLFVSWLGASLLGSLRETIERKSLTLEEW 288
>U40426-4|AAP40527.1| 144|Caenorhabditis elegans Diacylglycerol
kinase protein 2,isoform b protein.
Length = 144
Score = 31.5 bits (68), Expect = 0.49
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +2
Query: 377 PYGVLPLWRSNDLNLHCRWGESCD 448
P VLPL NDL+ +WG+ CD
Sbjct: 97 PVAVLPLGTGNDLSRLLKWGKKCD 120
>U40426-3|AAP40528.1| 351|Caenorhabditis elegans Diacylglycerol
kinase protein 2,isoform c protein.
Length = 351
Score = 31.5 bits (68), Expect = 0.49
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +2
Query: 377 PYGVLPLWRSNDLNLHCRWGESCD 448
P VLPL NDL+ +WG+ CD
Sbjct: 97 PVAVLPLGTGNDLSRLLKWGKKCD 120
>U40426-2|AAP40526.1| 536|Caenorhabditis elegans Diacylglycerol
kinase protein 2,isoform a protein.
Length = 536
Score = 31.5 bits (68), Expect = 0.49
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +2
Query: 377 PYGVLPLWRSNDLNLHCRWGESCD 448
P VLPL NDL+ +WG+ CD
Sbjct: 282 PVAVLPLGTGNDLSRLLKWGKKCD 305
>Z73907-1|CAA98124.1| 4753|Caenorhabditis elegans Hypothetical protein
F29D11.1 protein.
Length = 4753
Score = 27.9 bits (59), Expect = 6.1
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +3
Query: 213 KPELSSRPRAAGGSDARCV*KHFLCTMEGPD 305
+P + R A GG DA+C+ K + C E PD
Sbjct: 3624 EPNCTERQFACGGDDAKCIPKLWYCDGE-PD 3653
>U28741-1|AAA68325.2| 256|Caenorhabditis elegans Hypothetical
protein F35D2.3 protein.
Length = 256
Score = 27.9 bits (59), Expect = 6.1
Identities = 15/34 (44%), Positives = 19/34 (55%)
Frame = -3
Query: 316 EYDESGPSIVHRKCF*THRASLPPAARGRLLNSG 215
+Y ++G SIV+ KC T R P R R LN G
Sbjct: 30 DYCKNGGSIVNGKCECTLRYEGPQCERERCLNGG 63
>M96150-1|AAA28105.1| 4753|Caenorhabditis elegans LDL receptor-related
protein protein.
Length = 4753
Score = 27.9 bits (59), Expect = 6.1
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +3
Query: 213 KPELSSRPRAAGGSDARCV*KHFLCTMEGPD 305
+P + R A GG DA+C+ K + C E PD
Sbjct: 3624 EPNCTERQFACGGDDAKCIPKLWYCDGE-PD 3653
>AL032654-9|CAA21720.1| 404|Caenorhabditis elegans Hypothetical
protein Y52B11A.9 protein.
Length = 404
Score = 27.9 bits (59), Expect = 6.1
Identities = 19/54 (35%), Positives = 25/54 (46%)
Frame = -3
Query: 397 ERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF*THRASLPPAAR 236
+RK V G A +S F + K++ DE GPS RK S PAA+
Sbjct: 213 DRKLDVK-SGVASAKISIFDMPKVKKEDPDEPGPSQPSRKSGKKRSRSRSPAAK 265
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,760,741
Number of Sequences: 27780
Number of extensions: 279696
Number of successful extensions: 792
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 774
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 786
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1332243108
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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