Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--2346
         (695 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory recept...    25   0.78 
AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory recept...    25   0.78 
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    25   0.78 
AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory recept...    24   1.4  
AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory recept...    22   4.2  

>AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory receptor
           candidate 45 protein.
          Length = 379

 Score = 24.6 bits (51), Expect = 0.78
 Identities = 15/45 (33%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
 Frame = -2

Query: 691 KKLYVIIIMTILVLN-FLVLYLIYQKIKPACFVCHEFSSRLNPNM 560
           ++LY I  + +  L+ FL++ L +Q I  +CF       RLN N+
Sbjct: 70  RRLYTITHLVLDYLDEFLIVALAFQVILNSCFCDPAKWIRLNNNL 114


>AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory receptor
           candidate 8 protein.
          Length = 379

 Score = 24.6 bits (51), Expect = 0.78
 Identities = 15/45 (33%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
 Frame = -2

Query: 691 KKLYVIIIMTILVLN-FLVLYLIYQKIKPACFVCHEFSSRLNPNM 560
           ++LY I  + +  L+ FL++ L +Q I  +CF       RLN N+
Sbjct: 70  RRLYTITHLVLDYLDEFLIVALAFQVILNSCFCDPAKWIRLNNNL 114


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 24.6 bits (51), Expect = 0.78
 Identities = 9/31 (29%), Positives = 13/31 (41%)
 Frame = +2

Query: 407 CISGPVHVESTVHSSARTIRCSCQTSTI*YV 499
           C   P     T H    +  CSC + T+ Y+
Sbjct: 226 CKPNPCQNGGTCHDLVNSFSCSCPSGTLGYI 256


>AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory receptor
           candidate 38 protein.
          Length = 436

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 10/19 (52%), Positives = 11/19 (57%)
 Frame = +2

Query: 335 TSQDPTEHLNVNFFDFNRN 391
           T   PT+   V FFD NRN
Sbjct: 377 TEMSPTDISLVGFFDVNRN 395


>AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory receptor
           candidate 57 protein.
          Length = 387

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = -2

Query: 685 LYVIIIMTILVLNFLVLYLIY 623
           L +II++   VLN   L+L+Y
Sbjct: 245 LEIIIVVITYVLNLTDLFLVY 265


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 160,578
Number of Sequences: 336
Number of extensions: 3608
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18322480
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)