Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--2346
         (695 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ292755-1|CAC00630.1|  837|Anopheles gambiae integrin beta subu...    25   1.7  
AY146746-1|AAO12061.1|  333|Anopheles gambiae odorant-binding pr...    23   7.0  

>AJ292755-1|CAC00630.1|  837|Anopheles gambiae integrin beta subunit
           protein.
          Length = 837

 Score = 25.4 bits (53), Expect = 1.7
 Identities = 17/58 (29%), Positives = 26/58 (44%), Gaps = 4/58 (6%)
 Frame = -3

Query: 438 VDSTCTGPDIHNIQSGFRLK----SKKFTFRCSVGSCDVTNVRERCRDACSLSLSLKE 277
           ++  C+ P  H     +R +    S   T++C +  CD T   +RC   CS   SL E
Sbjct: 489 IEMLCSCPCEHPSDPEYRERADECSNAGTYKCGICECDGTYHGQRCE--CSAMESLLE 544



 Score = 23.4 bits (48), Expect = 7.0
 Identities = 16/51 (31%), Positives = 22/51 (43%), Gaps = 2/51 (3%)
 Frame = -1

Query: 326 CER--DAEMRALSLSLSKKFTFRCSVGSCDVTNVRKRWRNACSACSLSVSP 180
           CE   D E R  +   S   T++C +  CD T   +R    CSA    + P
Sbjct: 497 CEHPSDPEYRERADECSNAGTYKCGICECDGTYHGQRCE--CSAMESLLEP 545


>AY146746-1|AAO12061.1|  333|Anopheles gambiae odorant-binding
           protein AgamOBP43 protein.
          Length = 333

 Score = 23.4 bits (48), Expect = 7.0
 Identities = 9/28 (32%), Positives = 17/28 (60%)
 Frame = +3

Query: 84  RRRACIRCISPSLSHACDVTRPYRACEC 167
           R R+C+  + PS++  C+  R +R+  C
Sbjct: 117 RTRSCLAALEPSVTDVCE--RAHRSFLC 142


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 717,473
Number of Sequences: 2352
Number of extensions: 15366
Number of successful extensions: 13
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 70668195
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)