Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--2345
         (551 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    25   0.33 
AJ457831-1|CAD29886.1|  249|Tribolium castaneum helix-loop-helix...    23   2.3  
X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Triboliu...    22   4.1  
U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II p...    22   4.1  
U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I pr...    22   4.1  
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    21   7.2  
EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic hor...    21   9.5  
DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic hor...    21   9.5  
AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia or...    21   9.5  

>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 25.4 bits (53), Expect = 0.33
 Identities = 13/45 (28%), Positives = 22/45 (48%)
 Frame = +2

Query: 395 LLLSVFFNTVSFVLVSSFSIMPRYLTTSVFICLTPFKEEVFAFWV 529
           L+L+   + +S        +M   +  S F+CL PF+  VF  W+
Sbjct: 271 LVLNKHIDNISLRARKQVVLMLGTVVLSFFLCLIPFR--VFILWI 313


>AJ457831-1|CAD29886.1|  249|Tribolium castaneum helix-loop-helix
           transcription factor protein.
          Length = 249

 Score = 22.6 bits (46), Expect = 2.3
 Identities = 10/33 (30%), Positives = 18/33 (54%)
 Frame = -3

Query: 402 SNSSLSVSPCRSPEPSEETSFNTFVVTKKSPTD 304
           ++S+ + SP +SPEP      +  V   + PT+
Sbjct: 210 ASSASNYSPSQSPEPESVRPLSLVVRRCEEPTE 242


>X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Tribolium
           castaneum mRNAfor alhpa amylase 3'region. ).
          Length = 489

 Score = 21.8 bits (44), Expect = 4.1
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = +1

Query: 463 VSYDIGLHMSHAFQGG 510
           + +  GL + +AFQGG
Sbjct: 261 IEFQYGLSLGNAFQGG 276


>U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II
           protein.
          Length = 490

 Score = 21.8 bits (44), Expect = 4.1
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = +1

Query: 463 VSYDIGLHMSHAFQGG 510
           + +  GL + +AFQGG
Sbjct: 262 IEFQYGLSLGNAFQGG 277


>U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I
           protein.
          Length = 490

 Score = 21.8 bits (44), Expect = 4.1
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = +1

Query: 463 VSYDIGLHMSHAFQGG 510
           + +  GL + +AFQGG
Sbjct: 262 IEFQYGLSLGNAFQGG 277


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 21.0 bits (42), Expect = 7.2
 Identities = 9/33 (27%), Positives = 17/33 (51%)
 Frame = +3

Query: 18  HMVWEV*NVHYHRVYLVNPFVFLDFS*RLLFWT 116
           H ++ V ++ Y   YL++  +  D    L FW+
Sbjct: 244 HFIFIVVSIFYMSAYLISNPIMWDRVMLLTFWS 276


>EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 20.6 bits (41), Expect = 9.5
 Identities = 7/11 (63%), Positives = 10/11 (90%)
 Frame = +2

Query: 86  GLFLTSFVLDC 118
           GL+L+SF+L C
Sbjct: 136 GLYLSSFILVC 146


>DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 20.6 bits (41), Expect = 9.5
 Identities = 7/11 (63%), Positives = 10/11 (90%)
 Frame = +2

Query: 86  GLFLTSFVLDC 118
           GL+L+SF+L C
Sbjct: 136 GLYLSSFILVC 146


>AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 477

 Score = 20.6 bits (41), Expect = 9.5
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = -3

Query: 105 KDVRKSPEKQTGLPNK 58
           K  RKS +++ GLP +
Sbjct: 122 KTTRKSSQQENGLPRR 137


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 123,444
Number of Sequences: 336
Number of extensions: 2647
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 13621010
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)