Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--2345
(551 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_04_0134 - 17593449-17594702 33 0.11
02_04_0437 - 22938263-22938273,22938345-22938444,22938727-229389... 31 0.46
06_01_0926 - 7139220-7139318,7139394-7139478,7139573-7139643,713... 31 0.61
05_06_0116 - 25719030-25719458,25720138-25720301,25720390-257206... 31 0.61
02_01_0008 - 50576-50671,50767-50829,50918-50961,51048-51129,522... 31 0.81
07_03_1339 + 25879246-25881154,25881502-25881696,25881777-258819... 30 1.4
06_03_0497 + 21424732-21424899,21424992-21425057,21425176-214256... 30 1.4
03_06_0125 + 31850858-31850905,31851032-31851109,31851221-318513... 30 1.4
08_01_1064 + 10841095-10842326,10842412-10842663,10842942-108430... 29 2.5
02_05_0183 + 26537676-26537752,26538481-26538649,26538736-265389... 29 2.5
11_06_0455 + 23792326-23792442,23793720-23794125,23794474-237945... 28 4.3
10_02_0167 - 6100676-6102111,6102174-6102708,6102967-6103975,610... 28 4.3
09_01_0027 - 469856-470773,470780-471261,471296-471408,471453-47... 28 4.3
05_05_0030 - 21698625-21698752,21699589-21699627,21699708-216998... 27 7.5
02_05_1326 - 35712102-35712473,35712608-35712720,35712944-357148... 27 10.0
02_02_0095 + 6716327-6716335,6717302-6717451,6717523-6717583,671... 27 10.0
01_03_0022 + 11724319-11725381,11725476-11725582 27 10.0
>03_04_0134 - 17593449-17594702
Length = 417
Score = 33.5 bits (73), Expect = 0.11
Identities = 18/37 (48%), Positives = 22/37 (59%)
Frame = -3
Query: 414 KKTDSNSSLSVSPCRSPEPSEETSFNTFVVTKKSPTD 304
K+ +SN SL P PEPS ETSF++ T SP D
Sbjct: 302 KRINSNCSLVKPPADQPEPSIETSFSS-ASTSVSPAD 337
>02_04_0437 -
22938263-22938273,22938345-22938444,22938727-22938908,
22938989-22939092,22939792-22939857,22940032-22940105,
22940241-22940309,22940902-22941028,22941740-22942971,
22943163-22943486,22943500-22943793
Length = 860
Score = 31.5 bits (68), Expect = 0.46
Identities = 23/79 (29%), Positives = 37/79 (46%)
Frame = -3
Query: 450 ENEETKTNDTVLKKTDSNSSLSVSPCRSPEPSEETSFNTFVVTKKSPTDIVDFISHEKDD 271
EN ND + +TDS+ V+P PS T T V T +P D+
Sbjct: 399 ENVSAPENDDDMDETDSDDE--VTPENQKVPSSVT---TRVATGSTPKDVSPLSRGPPAQ 453
Query: 270 IVKTSVLSAHFPDKTSKTP 214
+ ++++LSA+ ++ KTP
Sbjct: 454 LDRSTLLSAYRYEQREKTP 472
>06_01_0926 - 7139220-7139318,7139394-7139478,7139573-7139643,
7139996-7140076,7140805-7140895,7141242-7141330,
7141749-7141802,7141906-7142085,7142175-7142237,
7142575-7142705,7142807-7142900,7143343-7143684,
7143957-7144348,7145010-7148487,7149101-7149187,
7149324-7149367,7149495-7149591,7150429-7150572
Length = 1873
Score = 31.1 bits (67), Expect = 0.61
Identities = 34/137 (24%), Positives = 59/137 (43%)
Frame = -3
Query: 426 DTVLKKTDSNSSLSVSPCRSPEPSEETSFNTFVVTKKSPTDIVDFISHEKDDIVKTSVLS 247
DT +K + L+V+ + EPS++ S NT K S TDI D++ T +
Sbjct: 660 DTSTEKLSESDILAVASSQITEPSKKPSENTAENEKPSQTDIA------TDELPLTQSVE 713
Query: 246 AHFPDKTSKTPRDGSPTKLQDLTQNIYEKHGNESHVYEEKITLQSKTKDVRKSPEKQTGL 67
A + +P D + ++ + + I ES + EK+ S+T + + P K+
Sbjct: 714 A----MSEPSPSDAAHQEISE--REILTDKLPESTMAVEKL---SQTATLTEKPSKEDAA 764
Query: 66 PNKPDDSEHFKLPKPYE 16
P +E + P E
Sbjct: 765 EKLPQTNEPSEQPHESE 781
>05_06_0116 - 25719030-25719458,25720138-25720301,25720390-25720643,
25720727-25720782,25721032-25721169,25721315-25721421,
25721502-25721681,25721757-25721852,25721926-25722007,
25722084-25722425,25722666-25722695,25722788-25722880,
25722963-25723040,25723122-25723222,25723833-25724058,
25724647-25724760,25724855-25725009,25725515-25725554
Length = 894
Score = 31.1 bits (67), Expect = 0.61
Identities = 24/99 (24%), Positives = 42/99 (42%)
Frame = -3
Query: 426 DTVLKKTDSNSSLSVSPCRSPEPSEETSFNTFVVTKKSPTDIVDFISHEKDDIVKTSVLS 247
DT+++K L + + PS N + K S +D+ +S + + S LS
Sbjct: 758 DTIVRKDTEIEQLQLMKDKVKSPSFAVDINGASMPKNSNSDLRSVLSITTN---QQSQLS 814
Query: 246 AHFPDKTSKTPRDGSPTKLQDLTQNIYEKHGNESHVYEE 130
P ++ RDG PT D+T ++ E + E+
Sbjct: 815 D--PQSYAEVNRDGGPTSYTDITPTCLDEADFEDNASED 851
>02_01_0008 -
50576-50671,50767-50829,50918-50961,51048-51129,
52205-52371,52502-52654,52780-52960,53452-53540,
53599-53799,54804-55147,55397-55626
Length = 549
Score = 30.7 bits (66), Expect = 0.81
Identities = 31/142 (21%), Positives = 57/142 (40%), Gaps = 6/142 (4%)
Frame = -3
Query: 450 ENEETKTNDTVL-KKTDSNSSLSVSPCRSPEPSEETSFNTFVVTKKSPTDIVDFISHEKD 274
E+EE + ++L K DS+S S C +P PS + + + + + DI +
Sbjct: 33 EDEEAHPHSSILLKDADSDSDSDDSSCATPRPSSYAT-HQWPQSYRQSIDIYSSVQSPNL 91
Query: 273 DIVKTSVLSAHFPDKTSKTPRDGSPTKLQDLTQNIYEKHGNESHVYEEKITLQSKTKDVR 94
+ T LS + + R +P L +L + + + ++ Q D R
Sbjct: 92 SFLGTPTLSRLSNSFLTNSFRGKTPEILSNLVKPLLRPSSSSDDQQQQ----QQHDDDTR 147
Query: 93 KS-----PEKQTGLPNKPDDSE 43
KS P ++ L P+D +
Sbjct: 148 KSSQYLLPSRKPSLQQIPEDQK 169
>07_03_1339 +
25879246-25881154,25881502-25881696,25881777-25881928,
25882147-25882607,25883723-25883810,25884066-25884135,
25884288-25884361,25884456-25884524,25884647-25884724,
25884946-25885070,25885168-25885240,25885508-25885566,
25885650-25886027,25886134-25886236,25886332-25886544
Length = 1348
Score = 29.9 bits (64), Expect = 1.4
Identities = 21/74 (28%), Positives = 30/74 (40%), Gaps = 5/74 (6%)
Frame = -3
Query: 306 DIVDFISHEKDDIVKTSVLSAHFPDKTSKTPRDGSPTKL-----QDLTQNIYEKHGNESH 142
D D K DIVK S + +TP D L QD ++ +K G+
Sbjct: 430 DNFDLGLESKQDIVKPSSSNPSSVGDDLQTPDDDKEISLIDMSLQDTDMSLKKKEGSPDS 489
Query: 141 VYEEKITLQSKTKD 100
+Y EK+ L + D
Sbjct: 490 IYPEKLNLDRSSGD 503
>06_03_0497 +
21424732-21424899,21424992-21425057,21425176-21425634,
21425945-21426088,21426172-21426306,21426418-21426808,
21427256-21427428,21427508-21427615,21427715-21427810,
21427896-21428003,21428644-21428792,21428924-21428925,
21429071-21429207,21429538-21429842,21430922-21431099,
21431192-21431305,21431373-21431504,21431610-21431843
Length = 1032
Score = 29.9 bits (64), Expect = 1.4
Identities = 21/73 (28%), Positives = 33/73 (45%)
Frame = -3
Query: 366 PEPSEETSFNTFVVTKKSPTDIVDFISHEKDDIVKTSVLSAHFPDKTSKTPRDGSPTKLQ 187
P E++ FV+ K P D+ D H D KT + ++ +S+ + PT Q
Sbjct: 551 PTKDLESNSTEFVIDIKGPYDVEDITGHTMD---KTKFILVNY-SNSSEDHKSQDPT--Q 604
Query: 186 DLTQNIYEKHGNE 148
D + NI K N+
Sbjct: 605 DESDNIPHKSTNQ 617
>03_06_0125 +
31850858-31850905,31851032-31851109,31851221-31851337,
31851346-31851642,31852498-31852509,31852737-31852822,
31853516-31853660,31853767-31853862,31854333-31854424,
31854696-31854797,31854891-31855037,31855116-31855266,
31855418-31855480,31855570-31855806,31856081-31856185,
31856263-31856376,31856459-31857037,31857279-31857286,
31857858-31858004,31858077-31858203
Length = 916
Score = 29.9 bits (64), Expect = 1.4
Identities = 18/83 (21%), Positives = 41/83 (49%)
Frame = -3
Query: 525 QKAKTSSLKGVRHMKTDVVRYLGMIENEETKTNDTVLKKTDSNSSLSVSPCRSPEPSEET 346
++ KT K + H+ T V Y MI+N + + + + + LSV P +E +
Sbjct: 450 KEIKTHVHKNIGHLDTHVEDYKRMIDNLQVEVSQLKKELAEKEHQLSVKPTEKAADNELS 509
Query: 345 SFNTFVVTKKSPTDIVDFISHEK 277
N ++++++ ++ + I+ +K
Sbjct: 510 WLN--ILSQETGENVQERINLQK 530
>08_01_1064 +
10841095-10842326,10842412-10842663,10842942-10843020,
10843274-10843459
Length = 582
Score = 29.1 bits (62), Expect = 2.5
Identities = 24/89 (26%), Positives = 35/89 (39%), Gaps = 1/89 (1%)
Frame = -3
Query: 381 SPCRSPEPSEETSFNTFVVTKKSPTDIVDFISHEKDDIVKTSVLSAHFPDKTSKTPRDGS 202
SP + PE E T + + P + S KD+ + +++ K RD
Sbjct: 252 SPTKDPEVQETTVSEKTTTSSEVPRVLRSHDSKSKDENKEKFMVTVFRGRKERAKLRDDD 311
Query: 201 PTKLQDLTQNIYEKHGNESHVYE-EKITL 118
P K DL Y + S YE EK+ L
Sbjct: 312 PQKATDLAGPTYFATYDCSEKYEHEKVLL 340
>02_05_0183 +
26537676-26537752,26538481-26538649,26538736-26538910,
26539008-26539137,26540425-26540558,26540629-26540771,
26540894-26541092,26541183-26541514
Length = 452
Score = 29.1 bits (62), Expect = 2.5
Identities = 22/74 (29%), Positives = 33/74 (44%), Gaps = 5/74 (6%)
Frame = -3
Query: 222 KTPRDGSPTK-LQDLTQNIYEKHGNESHVYEEKITLQSKTKDVRKSPEKQTGLPNKPD-- 52
K+P + PTK + K N + YE ++ T+D K ++ + N PD
Sbjct: 18 KSPSNDPPTKPFLSVMYGRMPKKSNNTKYYEVLGVSKTATQDELKKAYRKAAIKNHPDKG 77
Query: 51 -DSEHFK-LPKPYE 16
D E FK L + YE
Sbjct: 78 GDPEKFKELAQAYE 91
>11_06_0455 +
23792326-23792442,23793720-23794125,23794474-23794583,
23795063-23795125,23795478-23795504
Length = 240
Score = 28.3 bits (60), Expect = 4.3
Identities = 30/119 (25%), Positives = 53/119 (44%), Gaps = 1/119 (0%)
Frame = -3
Query: 423 TVLKKTDSNSSLSVSPCRSPEPSEETSFNTF-VVTKKSPTDIVDFISHEKDDIVKTSVLS 247
TVL + + ++S S +P S E+SF+T+ + P D F ++D +V S
Sbjct: 41 TVLFRAGTVHAVSQSIEATPVDSSESSFDTYRSPPRPLPYDDPRFSPPQRDWLVSRHGPS 100
Query: 246 AHFPDKTSKTPRDGSPTKLQDLTQNIYEKHGNESHVYEEKITLQSKTKDVRKSPEKQTG 70
H P++ S+ R +++ + H + Y+ K+ S T K P K+ G
Sbjct: 101 CHSPEE-SEPLRANDDEEMETPSST----HKSSKTNYDTKMKRSSSTHG-EKLPTKEPG 153
>10_02_0167 -
6100676-6102111,6102174-6102708,6102967-6103975,
6104006-6105036
Length = 1336
Score = 28.3 bits (60), Expect = 4.3
Identities = 15/50 (30%), Positives = 24/50 (48%)
Frame = -3
Query: 330 VVTKKSPTDIVDFISHEKDDIVKTSVLSAHFPDKTSKTPRDGSPTKLQDL 181
+V K +D + S DDI S+L P+K SPT+L+++
Sbjct: 831 IVVKTKTSDSLRKRSTNSDDIASCSILRKANPEKIKAIENMKSPTRLKEV 880
>09_01_0027 -
469856-470773,470780-471261,471296-471408,471453-472003,
472089-472328
Length = 767
Score = 28.3 bits (60), Expect = 4.3
Identities = 18/72 (25%), Positives = 28/72 (38%)
Frame = -3
Query: 381 SPCRSPEPSEETSFNTFVVTKKSPTDIVDFISHEKDDIVKTSVLSAHFPDKTSKTPRDGS 202
SP + PE E T + + P + S KD+ + +++ K PRD
Sbjct: 608 SPAKDPEVQETTIPKKATTSSEVPRMLRSHDSKSKDENKEKFMVTVFRGGKERGKPRDDD 667
Query: 201 PTKLQDLTQNIY 166
P K +L Y
Sbjct: 668 PQKAAELAGPTY 679
>05_05_0030 -
21698625-21698752,21699589-21699627,21699708-21699822,
21699927-21699992,21701064-21701203,21701424-21701473,
21701608-21702045,21702757-21702839,21702941-21702977,
21703366-21703457,21703531-21703615,21703950-21704029,
21704049-21704105,21704350-21704747,21706322-21707223,
21707331-21707421,21708123-21710273,21710375-21710813,
21711180-21711299
Length = 1836
Score = 27.5 bits (58), Expect = 7.5
Identities = 19/53 (35%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Frame = +2
Query: 200 GEPSLGVLDVLSGK*ADRTDVFTMSSFSCD-MKSTMSVGDFFVTTKVLKEVSS 355
G P+LGV ++G+ + +F SS S + +TM G F T V VSS
Sbjct: 74 GTPNLGVGTAVAGRSCPSSTLFPGSSLSSTALLNTMHEGSFPQTALVAGSVSS 126
>02_05_1326 - 35712102-35712473,35712608-35712720,35712944-35714857,
35714942-35715135,35715237-35716786,35716946-35717049,
35717258-35717399,35717692-35717910
Length = 1535
Score = 27.1 bits (57), Expect = 10.0
Identities = 18/74 (24%), Positives = 29/74 (39%)
Frame = -3
Query: 234 DKTSKTPRDGSPTKLQDLTQNIYEKHGNESHVYEEKITLQSKTKDVRKSPEKQTGLPNKP 55
+KT PRDGS + + E + H Y + + ++PE G +
Sbjct: 1143 NKTPSDPRDGSISSFSGACNLLDESKYSTDHPYYSRSMSSGPECSLIETPEAARGESVET 1202
Query: 54 DDSEHFKLPKPYEP 13
DD E+F + P
Sbjct: 1203 DD-ENFSFEETLTP 1215
>02_02_0095 +
6716327-6716335,6717302-6717451,6717523-6717583,
6717646-6717725,6717802-6717903,6717982-6718471,
6718796-6719171,6720320-6720379,6720887-6721056,
6721287-6721340,6721384-6721523,6722362-6722511,
6722582-6722642,6722705-6722784,6722933-6723034,
6723111-6723612,6724401-6724776,6725419-6725493,
6726058-6726198,6726264-6726282
Length = 1065
Score = 27.1 bits (57), Expect = 10.0
Identities = 12/40 (30%), Positives = 20/40 (50%), Gaps = 3/40 (7%)
Frame = -3
Query: 117 QSKTKDVRKSPEKQTGLPN---KPDDSEHFKLPKPYEPIE 7
+ K K+ +K K+ P KP++ E PKP P++
Sbjct: 794 EQKPKEAKKEAPKEAPKPKAAEKPEEEEEAPKPKPKNPLD 833
>01_03_0022 + 11724319-11725381,11725476-11725582
Length = 389
Score = 27.1 bits (57), Expect = 10.0
Identities = 13/39 (33%), Positives = 19/39 (48%)
Frame = -3
Query: 324 TKKSPTDIVDFISHEKDDIVKTSVLSAHFPDKTSKTPRD 208
TK P I ++ KD + TS +H+ + TPRD
Sbjct: 70 TKSLPDVICGTVNRTKDAVAATSYNCSHYINSKYLTPRD 108
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,074,092
Number of Sequences: 37544
Number of extensions: 248255
Number of successful extensions: 796
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 770
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 796
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1245816180
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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