BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--2344
(580 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AM085517-1|CAJ30215.1| 339|Anopheles gambiae putative angiotens... 25 1.3
DQ182017-1|ABA56309.1| 383|Anopheles gambiae G(alpha)s protein. 24 3.1
DQ974172-1|ABJ52812.1| 409|Anopheles gambiae serpin 13 protein. 23 5.4
AF378002-1|AAL16724.1| 336|Anopheles gambiae putative transposa... 23 7.2
DQ182015-1|ABA56307.1| 353|Anopheles gambiae G(alpha)q2 protein. 23 9.5
AY724808-1|AAW50317.1| 206|Anopheles gambiae G protein alpha su... 23 9.5
AY724807-1|AAW50316.1| 127|Anopheles gambiae G protein alpha su... 23 9.5
AY724806-1|AAW50315.1| 163|Anopheles gambiae G protein alpha su... 23 9.5
AY724805-1|AAW50314.1| 162|Anopheles gambiae G protein alpha su... 23 9.5
AY724804-1|AAW50313.1| 163|Anopheles gambiae G protein alpha su... 23 9.5
AY724803-1|AAW50312.1| 162|Anopheles gambiae G protein alpha su... 23 9.5
>AM085517-1|CAJ30215.1| 339|Anopheles gambiae putative angiotensin
converting enzymeprecursor protein.
Length = 339
Score = 25.4 bits (53), Expect = 1.3
Identities = 12/28 (42%), Positives = 17/28 (60%), Gaps = 2/28 (7%)
Frame = -1
Query: 541 YGDRR-YSPDSRYSPQRRYSPESR-YSP 464
Y DR Y+P Y + RY+P +R Y+P
Sbjct: 181 YRDRTPYNPSRDYDDRNRYNPNARPYNP 208
>DQ182017-1|ABA56309.1| 383|Anopheles gambiae G(alpha)s protein.
Length = 383
Score = 24.2 bits (50), Expect = 3.1
Identities = 6/17 (35%), Positives = 12/17 (70%)
Frame = +2
Query: 167 RSRWVDCMNTLISILFI 217
R +W+ C N + +I+F+
Sbjct: 220 RRKWIQCFNDVTAIIFV 236
>DQ974172-1|ABJ52812.1| 409|Anopheles gambiae serpin 13 protein.
Length = 409
Score = 23.4 bits (48), Expect = 5.4
Identities = 9/14 (64%), Positives = 12/14 (85%)
Frame = +2
Query: 194 TLISILFIGFRGTT 235
T +S+LF+G RGTT
Sbjct: 16 TTLSMLFLGTRGTT 29
>AF378002-1|AAL16724.1| 336|Anopheles gambiae putative transposase
protein.
Length = 336
Score = 23.0 bits (47), Expect = 7.2
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = +1
Query: 334 RYETLIHNYLRIYLWN 381
R E ++HNYL LW+
Sbjct: 5 RREKIVHNYLENPLWS 20
>DQ182015-1|ABA56307.1| 353|Anopheles gambiae G(alpha)q2 protein.
Length = 353
Score = 22.6 bits (46), Expect = 9.5
Identities = 6/17 (35%), Positives = 11/17 (64%)
Frame = +2
Query: 167 RSRWVDCMNTLISILFI 217
R +W+ C + SI+F+
Sbjct: 207 RRKWIHCFENVTSIIFL 223
>AY724808-1|AAW50317.1| 206|Anopheles gambiae G protein alpha
subunit AgGq6 protein.
Length = 206
Score = 22.6 bits (46), Expect = 9.5
Identities = 6/17 (35%), Positives = 11/17 (64%)
Frame = +2
Query: 167 RSRWVDCMNTLISILFI 217
R +W+ C + SI+F+
Sbjct: 64 RRKWIHCFENVTSIIFL 80
>AY724807-1|AAW50316.1| 127|Anopheles gambiae G protein alpha
subunit AgGq5 protein.
Length = 127
Score = 22.6 bits (46), Expect = 9.5
Identities = 6/17 (35%), Positives = 11/17 (64%)
Frame = +2
Query: 167 RSRWVDCMNTLISILFI 217
R +W+ C + SI+F+
Sbjct: 21 RRKWIHCFENVTSIIFL 37
>AY724806-1|AAW50315.1| 163|Anopheles gambiae G protein alpha
subunit AgGq4 protein.
Length = 163
Score = 22.6 bits (46), Expect = 9.5
Identities = 6/17 (35%), Positives = 11/17 (64%)
Frame = +2
Query: 167 RSRWVDCMNTLISILFI 217
R +W+ C + SI+F+
Sbjct: 21 RRKWIHCFENVTSIIFL 37
>AY724805-1|AAW50314.1| 162|Anopheles gambiae G protein alpha
subunit AgGq3 protein.
Length = 162
Score = 22.6 bits (46), Expect = 9.5
Identities = 6/17 (35%), Positives = 11/17 (64%)
Frame = +2
Query: 167 RSRWVDCMNTLISILFI 217
R +W+ C + SI+F+
Sbjct: 20 RRKWIHCFENVTSIIFL 36
>AY724804-1|AAW50313.1| 163|Anopheles gambiae G protein alpha
subunit AgGq2 protein.
Length = 163
Score = 22.6 bits (46), Expect = 9.5
Identities = 6/17 (35%), Positives = 11/17 (64%)
Frame = +2
Query: 167 RSRWVDCMNTLISILFI 217
R +W+ C + SI+F+
Sbjct: 21 RRKWIHCFENVTSIIFL 37
>AY724803-1|AAW50312.1| 162|Anopheles gambiae G protein alpha
subunit AgGq1 protein.
Length = 162
Score = 22.6 bits (46), Expect = 9.5
Identities = 6/17 (35%), Positives = 11/17 (64%)
Frame = +2
Query: 167 RSRWVDCMNTLISILFI 217
R +W+ C + SI+F+
Sbjct: 20 RRKWIHCFENVTSIIFL 36
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 483,999
Number of Sequences: 2352
Number of extensions: 7664
Number of successful extensions: 20
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 55086417
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -