Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--2344
         (580 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF160940-1|AAD46880.1| 1260|Drosophila melanogaster BcDNA.LD1916...    31   0.85 
AE014297-55|AAF52146.1| 1260|Drosophila melanogaster CG9776-PA, ...    31   0.85 
BT024975-1|ABE01205.1| 1027|Drosophila melanogaster IP14862p pro...    30   2.6  
BT023928-1|ABB36432.1| 1549|Drosophila melanogaster RE59252p pro...    30   2.6  
AF334032-1|AAK09434.1| 1549|Drosophila melanogaster no-mechanore...    30   2.6  
AF334031-1|AAK09433.1| 1557|Drosophila melanogaster no-mechanore...    30   2.6  
AE013599-1269|AAM68729.1| 1557|Drosophila melanogaster CG13207-P...    30   2.6  
AE013599-1268|AAF58668.2| 1557|Drosophila melanogaster CG13207-P...    30   2.6  
AE013599-1267|AAS64916.1| 1549|Drosophila melanogaster CG13207-P...    30   2.6  
AE013599-1266|AAM68728.2| 1549|Drosophila melanogaster CG13207-P...    30   2.6  

>AF160940-1|AAD46880.1| 1260|Drosophila melanogaster BcDNA.LD19168
           protein.
          Length = 1260

 Score = 31.5 bits (68), Expect = 0.85
 Identities = 16/34 (47%), Positives = 18/34 (52%)
 Frame = -1

Query: 574 RAGYP*PLQRRYGDRRYSPDSRYSPQRRYSPESR 473
           R  Y  P   RY  RR+  D R SP+RR SP  R
Sbjct: 88  RRRYDSPDYGRYSRRRFDRDRRRSPERRRSPPRR 121


>AE014297-55|AAF52146.1| 1260|Drosophila melanogaster CG9776-PA,
           isoform A protein.
          Length = 1260

 Score = 31.5 bits (68), Expect = 0.85
 Identities = 16/34 (47%), Positives = 18/34 (52%)
 Frame = -1

Query: 574 RAGYP*PLQRRYGDRRYSPDSRYSPQRRYSPESR 473
           R  Y  P   RY  RR+  D R SP+RR SP  R
Sbjct: 88  RRRYDSPDYGRYSRRRFDRDRRRSPERRRSPPRR 121


>BT024975-1|ABE01205.1| 1027|Drosophila melanogaster IP14862p
           protein.
          Length = 1027

 Score = 29.9 bits (64), Expect = 2.6
 Identities = 13/26 (50%), Positives = 16/26 (61%)
 Frame = -1

Query: 541 YGDRRYSPDSRYSPQRRYSPESRYSP 464
           + DRRY P S  SP+  Y P+SR  P
Sbjct: 713 FPDRRYRPSSMDSPRYPYLPDSRGPP 738


>BT023928-1|ABB36432.1| 1549|Drosophila melanogaster RE59252p
           protein.
          Length = 1549

 Score = 29.9 bits (64), Expect = 2.6
 Identities = 13/26 (50%), Positives = 16/26 (61%)
 Frame = -1

Query: 541 YGDRRYSPDSRYSPQRRYSPESRYSP 464
           + DRRY P S  SP+  Y P+SR  P
Sbjct: 713 FPDRRYRPSSMDSPRYPYLPDSRGPP 738


>AF334032-1|AAK09434.1| 1549|Drosophila melanogaster
           no-mechanoreceptor potential Ashort isoform protein.
          Length = 1549

 Score = 29.9 bits (64), Expect = 2.6
 Identities = 13/26 (50%), Positives = 16/26 (61%)
 Frame = -1

Query: 541 YGDRRYSPDSRYSPQRRYSPESRYSP 464
           + DRRY P S  SP+  Y P+SR  P
Sbjct: 713 FPDRRYRPSSMDSPRYPYLPDSRGPP 738


>AF334031-1|AAK09433.1| 1557|Drosophila melanogaster
           no-mechanoreceptor potential Along isoform protein.
          Length = 1557

 Score = 29.9 bits (64), Expect = 2.6
 Identities = 13/26 (50%), Positives = 16/26 (61%)
 Frame = -1

Query: 541 YGDRRYSPDSRYSPQRRYSPESRYSP 464
           + DRRY P S  SP+  Y P+SR  P
Sbjct: 713 FPDRRYRPSSMDSPRYPYLPDSRGPP 738


>AE013599-1269|AAM68729.1| 1557|Drosophila melanogaster CG13207-PB,
           isoform B protein.
          Length = 1557

 Score = 29.9 bits (64), Expect = 2.6
 Identities = 13/26 (50%), Positives = 16/26 (61%)
 Frame = -1

Query: 541 YGDRRYSPDSRYSPQRRYSPESRYSP 464
           + DRRY P S  SP+  Y P+SR  P
Sbjct: 713 FPDRRYRPSSMDSPRYPYLPDSRGPP 738


>AE013599-1268|AAF58668.2| 1557|Drosophila melanogaster CG13207-PA,
           isoform A protein.
          Length = 1557

 Score = 29.9 bits (64), Expect = 2.6
 Identities = 13/26 (50%), Positives = 16/26 (61%)
 Frame = -1

Query: 541 YGDRRYSPDSRYSPQRRYSPESRYSP 464
           + DRRY P S  SP+  Y P+SR  P
Sbjct: 713 FPDRRYRPSSMDSPRYPYLPDSRGPP 738


>AE013599-1267|AAS64916.1| 1549|Drosophila melanogaster CG13207-PD,
           isoform D protein.
          Length = 1549

 Score = 29.9 bits (64), Expect = 2.6
 Identities = 13/26 (50%), Positives = 16/26 (61%)
 Frame = -1

Query: 541 YGDRRYSPDSRYSPQRRYSPESRYSP 464
           + DRRY P S  SP+  Y P+SR  P
Sbjct: 713 FPDRRYRPSSMDSPRYPYLPDSRGPP 738


>AE013599-1266|AAM68728.2| 1549|Drosophila melanogaster CG13207-PC,
           isoform C protein.
          Length = 1549

 Score = 29.9 bits (64), Expect = 2.6
 Identities = 13/26 (50%), Positives = 16/26 (61%)
 Frame = -1

Query: 541 YGDRRYSPDSRYSPQRRYSPESRYSP 464
           + DRRY P S  SP+  Y P+SR  P
Sbjct: 713 FPDRRYRPSSMDSPRYPYLPDSRGPP 738


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,452,018
Number of Sequences: 53049
Number of extensions: 352920
Number of successful extensions: 957
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 910
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 947
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2296745289
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)