Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--2343
         (687 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY008258-1|AAG16637.1| 2035|Drosophila melanogaster ecdysone rec...    29   7.9  
AE014134-1613|AAF52754.2| 2047|Drosophila melanogaster CG13109-P...    29   7.9  

>AY008258-1|AAG16637.1| 2035|Drosophila melanogaster ecdysone
           receptor co-activatorTaiman protein.
          Length = 2035

 Score = 28.7 bits (61), Expect = 7.9
 Identities = 13/31 (41%), Positives = 18/31 (58%)
 Frame = +2

Query: 386 NTSDDTTNNKYNTIKNRQNTNESRVTGRQCS 478
           N S  TTNN  N+  N  NT++ + T  +CS
Sbjct: 308 NNSTTTTNNNTNS-NNNNNTSKPQATSTRCS 337


>AE014134-1613|AAF52754.2| 2047|Drosophila melanogaster CG13109-PA
           protein.
          Length = 2047

 Score = 28.7 bits (61), Expect = 7.9
 Identities = 13/31 (41%), Positives = 18/31 (58%)
 Frame = +2

Query: 386 NTSDDTTNNKYNTIKNRQNTNESRVTGRQCS 478
           N S  TTNN  N+  N  NT++ + T  +CS
Sbjct: 308 NNSTTTTNNNTNS-NNNNNTSKPQATSTRCS 337


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,035,653
Number of Sequences: 53049
Number of extensions: 518921
Number of successful extensions: 1595
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1393
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1583
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 3013199100
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)