Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--2341
         (562 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X79198-1|CAA55790.1| 1938|Homo sapiens host cell factor protein.       30   6.4  
BC063435-1|AAH63435.1|  428|Homo sapiens HCFC1 protein protein.        30   6.4  
BC030560-1|AAH30560.1|  551|Homo sapiens HCFC1 protein protein.        30   6.4  
BC019887-1|AAH19887.1|  551|Homo sapiens Unknown (protein for IM...    30   6.4  
AB209249-1|BAD92486.1|  733|Homo sapiens DHX57 protein variant p...    29   8.5  

>X79198-1|CAA55790.1| 1938|Homo sapiens host cell factor protein.
          Length = 1938

 Score = 29.9 bits (64), Expect = 6.4
 Identities = 16/56 (28%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
 Frame = +3

Query: 195 PPTMAYNEKIYTSK*YLEEEIIFTGGRTSCEVG-IATLPISAVTQQCVSVRRVGQL 359
           PP  ++   +YT K   + +++  GG + C +G + TL I  +T    S+  V  L
Sbjct: 99  PPRESHTAVVYTEKDNKKSKLVIYGGMSGCRLGDLWTLDIDTLTWNKPSLSGVAPL 154


>BC063435-1|AAH63435.1|  428|Homo sapiens HCFC1 protein protein.
          Length = 428

 Score = 29.9 bits (64), Expect = 6.4
 Identities = 16/56 (28%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
 Frame = +3

Query: 195 PPTMAYNEKIYTSK*YLEEEIIFTGGRTSCEVG-IATLPISAVTQQCVSVRRVGQL 359
           PP  ++   +YT K   + +++  GG + C +G + TL I  +T    S+  V  L
Sbjct: 198 PPRESHTAVVYTEKDNKKSKLVIYGGMSGCRLGDLWTLDIDTLTWNKPSLSGVAPL 253


>BC030560-1|AAH30560.1|  551|Homo sapiens HCFC1 protein protein.
          Length = 551

 Score = 29.9 bits (64), Expect = 6.4
 Identities = 16/56 (28%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
 Frame = +3

Query: 195 PPTMAYNEKIYTSK*YLEEEIIFTGGRTSCEVG-IATLPISAVTQQCVSVRRVGQL 359
           PP  ++   +YT K   + +++  GG + C +G + TL I  +T    S+  V  L
Sbjct: 198 PPRESHTAVVYTEKDNKKSKLVIYGGMSGCRLGDLWTLDIDTLTWNKPSLSGVAPL 253


>BC019887-1|AAH19887.1|  551|Homo sapiens Unknown (protein for
           IMAGE:5142023) protein.
          Length = 551

 Score = 29.9 bits (64), Expect = 6.4
 Identities = 16/56 (28%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
 Frame = +3

Query: 195 PPTMAYNEKIYTSK*YLEEEIIFTGGRTSCEVG-IATLPISAVTQQCVSVRRVGQL 359
           PP  ++   +YT K   + +++  GG + C +G + TL I  +T    S+  V  L
Sbjct: 198 PPRESHTAVVYTEKDNKKSKLVIYGGMSGCRLGDLWTLDIDTLTWNKPSLSGVAPL 253


>AB209249-1|BAD92486.1|  733|Homo sapiens DHX57 protein variant
           protein.
          Length = 733

 Score = 29.5 bits (63), Expect = 8.5
 Identities = 11/30 (36%), Positives = 21/30 (70%)
 Frame = +3

Query: 162 HDNVSLLRYYDPPTMAYNEKIYTSK*YLEE 251
           + NV  +R++D P + Y+EKI TS+ ++ +
Sbjct: 614 YPNVVQVRHFDSPYLLYHEKIKTSRVFIRD 643


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 88,105,465
Number of Sequences: 237096
Number of extensions: 1862625
Number of successful extensions: 6863
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6803
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6863
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5646880600
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)