Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--2337
         (659 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory recept...    23   1.7  
AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain tran...    22   3.9  
AJ005422-1|CAA06528.1|  287|Tribolium castaneum caudal protein p...    22   3.9  
AJ005421-1|CAA06527.1|  249|Tribolium castaneum caudal protein p...    22   3.9  
AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein p...    22   3.9  
AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein p...    22   3.9  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    22   5.1  
AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory recept...    22   5.1  
AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory recept...    21   6.8  
AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory recept...    21   6.8  

>AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory receptor
           candidate 41 protein.
          Length = 398

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = +3

Query: 537 FSLQFVVVAVLPVLYSKYTIF 599
           F LQ + +  + V+Y+ YTIF
Sbjct: 230 FGLQILGILFVGVIYTTYTIF 250


>AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain
           transcription factor Labialprotein.
          Length = 353

 Score = 22.2 bits (45), Expect = 3.9
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = -3

Query: 378 YYHHFHIPKNSLFVN 334
           YYHH  IP+++  +N
Sbjct: 64  YYHHQTIPQDNPIIN 78


>AJ005422-1|CAA06528.1|  287|Tribolium castaneum caudal protein
           protein.
          Length = 287

 Score = 22.2 bits (45), Expect = 3.9
 Identities = 6/13 (46%), Positives = 11/13 (84%)
 Frame = -3

Query: 378 YYHHFHIPKNSLF 340
           ++HH H+P +S+F
Sbjct: 50  WHHHSHMPPHSVF 62


>AJ005421-1|CAA06527.1|  249|Tribolium castaneum caudal protein
           protein.
          Length = 249

 Score = 22.2 bits (45), Expect = 3.9
 Identities = 6/13 (46%), Positives = 11/13 (84%)
 Frame = -3

Query: 378 YYHHFHIPKNSLF 340
           ++HH H+P +S+F
Sbjct: 50  WHHHSHMPPHSVF 62


>AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein
           protein.
          Length = 210

 Score = 22.2 bits (45), Expect = 3.9
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = -3

Query: 378 YYHHFHIPKNSLFVN 334
           YYHH  IP+++  +N
Sbjct: 64  YYHHQTIPQDNPIIN 78


>AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein
           protein.
          Length = 253

 Score = 22.2 bits (45), Expect = 3.9
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = -3

Query: 378 YYHHFHIPKNSLFVN 334
           YYHH  IP+++  +N
Sbjct: 64  YYHHQTIPQDNPIIN 78


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 9/15 (60%), Positives = 12/15 (80%)
 Frame = +2

Query: 143 KNKFVSSKLLLLYTI 187
           ++ F SSKLL+LY I
Sbjct: 33  RSNFRSSKLLILYNI 47


>AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory receptor
           candidate 3 protein.
          Length = 398

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 9/15 (60%), Positives = 12/15 (80%)
 Frame = +2

Query: 143 KNKFVSSKLLLLYTI 187
           ++ F SSKLL+LY I
Sbjct: 51  RSNFRSSKLLILYNI 65


>AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory receptor
           candidate 45 protein.
          Length = 379

 Score = 21.4 bits (43), Expect = 6.8
 Identities = 10/32 (31%), Positives = 16/32 (50%)
 Frame = -1

Query: 227 VLLYKLLIFHSIHLWCIIIEALTKQIYSLESF 132
           V+LY L      ++W   +  +T Q Y+L  F
Sbjct: 143 VILYILATVFLAYVWICEMGVVTLQAYTLHLF 174


>AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory receptor
           candidate 8 protein.
          Length = 379

 Score = 21.4 bits (43), Expect = 6.8
 Identities = 10/32 (31%), Positives = 16/32 (50%)
 Frame = -1

Query: 227 VLLYKLLIFHSIHLWCIIIEALTKQIYSLESF 132
           V+LY L      ++W   +  +T Q Y+L  F
Sbjct: 143 VILYILATVFLAYVWICEMGVVTLQAYTLHLF 174


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 154,453
Number of Sequences: 336
Number of extensions: 3370
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17073220
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)