Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--2335
         (621 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2 ...    23   1.6  
DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11 pro...    23   2.7  
AJ850297-1|CAH64517.1|  539|Tribolium castaneum putative esteras...    21   6.3  
AJ850295-1|CAH64515.1|  539|Tribolium castaneum putative esteras...    21   6.3  
AJ850294-1|CAH64514.1|  539|Tribolium castaneum putative esteras...    21   6.3  
AJ850293-1|CAH64513.1|  539|Tribolium castaneum putative esteras...    21   6.3  
AJ850292-1|CAH64512.1|  539|Tribolium castaneum putative esteras...    21   6.3  

>AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2
           protein protein.
          Length = 301

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 10/28 (35%), Positives = 16/28 (57%)
 Frame = +1

Query: 439 LHGIASDSIPQFVLGAPKREITEQQREK 522
           LHG+  DS+   + G P     +Q+RE+
Sbjct: 46  LHGLPVDSLHSSMAGYPAGNQRKQRRER 73


>DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11
           protein.
          Length = 366

 Score = 22.6 bits (46), Expect = 2.7
 Identities = 17/43 (39%), Positives = 23/43 (53%), Gaps = 5/43 (11%)
 Frame = +1

Query: 97  KGTFEPGDINANL----HY-ILDVCVNDLFGALSEEKEVDKLH 210
           +G+F+P +INANL    HY  L V  +     L    E+D LH
Sbjct: 40  EGSFKPQNINANLCTHVHYAFLGVNSDGTLKILDSWNEID-LH 81


>AJ850297-1|CAH64517.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.4 bits (43), Expect = 6.3
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = +3

Query: 330 ETPLEENRFESTRGVNAHH 386
           + P+ ENRFE+ + V   H
Sbjct: 49  QPPVGENRFEAPKPVEPWH 67


>AJ850295-1|CAH64515.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.4 bits (43), Expect = 6.3
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = +3

Query: 330 ETPLEENRFESTRGVNAHH 386
           + P+ ENRFE+ + V   H
Sbjct: 49  QPPVGENRFEAPKPVEPWH 67


>AJ850294-1|CAH64514.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.4 bits (43), Expect = 6.3
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = +3

Query: 330 ETPLEENRFESTRGVNAHH 386
           + P+ ENRFE+ + V   H
Sbjct: 49  QPPVGENRFEAPKPVEPWH 67


>AJ850293-1|CAH64513.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.4 bits (43), Expect = 6.3
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = +3

Query: 330 ETPLEENRFESTRGVNAHH 386
           + P+ ENRFE+ + V   H
Sbjct: 49  QPPVGENRFEAPKPVEPWH 67


>AJ850292-1|CAH64512.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.4 bits (43), Expect = 6.3
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = +3

Query: 330 ETPLEENRFESTRGVNAHH 386
           + P+ ENRFE+ + V   H
Sbjct: 49  QPPVGENRFEAPKPVEPWH 67


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 117,704
Number of Sequences: 336
Number of extensions: 2003
Number of successful extensions: 9
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15875032
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)