Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--2335
(621 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ006778-1|CAA07243.1| 2785|Homo sapiens DRIM protein protein. 88 3e-17
AF072718-1|AAG35208.1| 879|Homo sapiens Key-1A6 protein protein. 84 4e-16
BC045640-1|AAH45640.1| 1115|Homo sapiens RAN binding protein 5 p... 33 0.81
Y08890-1|CAA70103.1| 1097|Homo sapiens Ran_GTP binding protein 5... 31 2.5
U72761-1|AAC51317.1| 1097|Homo sapiens karyopherin beta 3 protein. 31 2.5
BC019309-1|AAH19309.1| 1097|Homo sapiens RANBP5 protein protein. 31 2.5
BC001497-1|AAH01497.1| 1097|Homo sapiens RANBP5 protein protein. 31 2.5
AL356580-2|CAI13757.1| 1097|Homo sapiens RAN binding protein 5 p... 31 2.5
AL137120-1|CAI16520.1| 1097|Homo sapiens RAN binding protein 5 p... 31 2.5
>AJ006778-1|CAA07243.1| 2785|Homo sapiens DRIM protein protein.
Length = 2785
Score = 87.8 bits (208), Expect = 3e-17
Identities = 54/201 (26%), Positives = 100/201 (49%)
Frame = +1
Query: 1 LGVLFEHLTLLLTRGFQXXXXXXXXXXXXXXXKGTFEPGDINANLHYILDVCVNDLFGAL 180
L + + L L RG+Q + GD+++ L ++++ ++LFGA+
Sbjct: 1881 LQYVLKELQTTLVRGYQVHVLTFTVHMLLQGLTNKLQVGDLDSCLDIMIEIFNHELFGAV 1940
Query: 181 SEEKEVDKLHYKTPEAKPSKKSYVTLAIVSENITERCLINLLLPFKEVLEKHHSKKIVSK 360
+EEKEV ++ K EA+ SK SY + I+ + + + + L+LP KE+L+ S K+ K
Sbjct: 1941 AEEKEVKQILSKVMEARRSK-SYDSYEILGKFVGKDQVTKLILPLKEILQNTTSLKLARK 1999
Query: 361 VQEALMHITSGLVSNRFIDIESLFVFLHGIASDSIPQFVLGAPKREITEQQREKMLRAKP 540
V E L IT GL+ N+ + ES+ + +G+ S+++P + K + ++
Sbjct: 2000 VHETLRRITVGLIVNQEMTAESILLLSYGLISENLP-LLTEKEKNPVAPAPDPRL--PPQ 2056
Query: 541 DCFIVPEAPKRNKETQAKERQ 603
C ++P P R + R+
Sbjct: 2057 SCLLLPPTPVRGGQKAVVSRK 2077
>AF072718-1|AAG35208.1| 879|Homo sapiens Key-1A6 protein protein.
Length = 879
Score = 83.8 bits (198), Expect = 4e-16
Identities = 48/163 (29%), Positives = 90/163 (55%)
Frame = +1
Query: 115 GDINANLHYILDVCVNDLFGALSEEKEVDKLHYKTPEAKPSKKSYVTLAIVSENITERCL 294
GD+++ L ++++ ++LFGA++EEKEV ++ K EA+ SK SY + I+ + + + +
Sbjct: 13 GDLDSCLDIMIEIFNHELFGAVAEEKEVKQILSKVMEARRSK-SYDSYEILGKFVGKDQV 71
Query: 295 INLLLPFKEVLEKHHSKKIVSKVQEALMHITSGLVSNRFIDIESLFVFLHGIASDSIPQF 474
L+LP KE+L+ S K+ KV E L IT GL+ N+ + ES+ + +G+ S+++P
Sbjct: 72 TKLILPLKEILQNTTSLKLARKVHETLRRITVGLIVNQEMTAESILLLSYGLISENLP-L 130
Query: 475 VLGAPKREITEQQREKMLRAKPDCFIVPEAPKRNKETQAKERQ 603
+ K + ++ C ++P P R + R+
Sbjct: 131 LTEKEKNPVAPAPDPRL--PPQSCLLLPPTPVRGGQKAVVSRK 171
>BC045640-1|AAH45640.1| 1115|Homo sapiens RAN binding protein 5
protein.
Length = 1115
Score = 33.1 bits (72), Expect = 0.81
Identities = 29/107 (27%), Positives = 48/107 (44%), Gaps = 1/107 (0%)
Frame = +1
Query: 214 KTPEAKPSKKSYVTLAIVSENITERCLINLLLPFKEVLEKHHSKKIVSKVQEALMHITSG 393
+T E + +++ A N TE C +LL+P+ + L KH +V K+QE + T
Sbjct: 466 QTMEDQGNQRVQAHAAAALINFTEDCPKSLLIPYLDNLVKHLHSIMVLKLQELIQKGTKL 525
Query: 394 LVSNRFIDIESLFVFLHGIASDSIPQFVLGAPKRE-ITEQQREKMLR 531
++ I S+ +P + L P R+ I E +K LR
Sbjct: 526 VLEQVVTSIASV---ADTAEEKFVPYYDLFMPSRKHIVENAVQKELR 569
>Y08890-1|CAA70103.1| 1097|Homo sapiens Ran_GTP binding protein 5
protein.
Length = 1097
Score = 31.5 bits (68), Expect = 2.5
Identities = 28/107 (26%), Positives = 47/107 (43%), Gaps = 1/107 (0%)
Frame = +1
Query: 214 KTPEAKPSKKSYVTLAIVSENITERCLINLLLPFKEVLEKHHSKKIVSKVQEALMHITSG 393
+T E + +++ A N TE C +LL+P+ + L KH +V K+QE + T
Sbjct: 448 QTMEDQGNQRVQAHAAAALINFTEDCPKSLLIPYLDNLVKHLHSIMVLKLQELIQKGTKL 507
Query: 394 LVSNRFIDIESLFVFLHGIASDSIPQFVLGAPK-REITEQQREKMLR 531
++ I S+ +P + L P + I E +K LR
Sbjct: 508 VLEQVVTSIASV---ADTAEEKFVPYYDLFMPSLKHIVENAVQKELR 551
>U72761-1|AAC51317.1| 1097|Homo sapiens karyopherin beta 3 protein.
Length = 1097
Score = 31.5 bits (68), Expect = 2.5
Identities = 28/107 (26%), Positives = 47/107 (43%), Gaps = 1/107 (0%)
Frame = +1
Query: 214 KTPEAKPSKKSYVTLAIVSENITERCLINLLLPFKEVLEKHHSKKIVSKVQEALMHITSG 393
+T E + +++ A N TE C +LL+P+ + L KH +V K+QE + T
Sbjct: 448 QTMEDQGNQRVQAHAAAALINFTEDCPKSLLIPYLDNLVKHLHSIMVLKLQELIQKGTKL 507
Query: 394 LVSNRFIDIESLFVFLHGIASDSIPQFVLGAPK-REITEQQREKMLR 531
++ I S+ +P + L P + I E +K LR
Sbjct: 508 VLEQVVTSIASV---ADTAEEKFVPYYDLFMPSLKHIVENAVQKELR 551
>BC019309-1|AAH19309.1| 1097|Homo sapiens RANBP5 protein protein.
Length = 1097
Score = 31.5 bits (68), Expect = 2.5
Identities = 28/107 (26%), Positives = 47/107 (43%), Gaps = 1/107 (0%)
Frame = +1
Query: 214 KTPEAKPSKKSYVTLAIVSENITERCLINLLLPFKEVLEKHHSKKIVSKVQEALMHITSG 393
+T E + +++ A N TE C +LL+P+ + L KH +V K+QE + T
Sbjct: 448 QTMEDQGNQRVQAHAAAALINFTEDCPKSLLIPYLDNLVKHLHSIMVLKLQELIQKGTKL 507
Query: 394 LVSNRFIDIESLFVFLHGIASDSIPQFVLGAPK-REITEQQREKMLR 531
++ I S+ +P + L P + I E +K LR
Sbjct: 508 VLEQVVTSIASV---ADTAEEKFVPYYDLFMPSLKHIVENAVQKELR 551
>BC001497-1|AAH01497.1| 1097|Homo sapiens RANBP5 protein protein.
Length = 1097
Score = 31.5 bits (68), Expect = 2.5
Identities = 28/107 (26%), Positives = 47/107 (43%), Gaps = 1/107 (0%)
Frame = +1
Query: 214 KTPEAKPSKKSYVTLAIVSENITERCLINLLLPFKEVLEKHHSKKIVSKVQEALMHITSG 393
+T E + +++ A N TE C +LL+P+ + L KH +V K+QE + T
Sbjct: 448 QTMEDQGNQRVQAHAAAALINFTEDCPKSLLIPYLDNLVKHLHSIMVLKLQELIQKGTKL 507
Query: 394 LVSNRFIDIESLFVFLHGIASDSIPQFVLGAPK-REITEQQREKMLR 531
++ I S+ +P + L P + I E +K LR
Sbjct: 508 VLEQVVTSIASV---ADTAEEKFVPYYDLFMPSLKHIVENAVQKELR 551
>AL356580-2|CAI13757.1| 1097|Homo sapiens RAN binding protein 5
protein.
Length = 1097
Score = 31.5 bits (68), Expect = 2.5
Identities = 28/107 (26%), Positives = 47/107 (43%), Gaps = 1/107 (0%)
Frame = +1
Query: 214 KTPEAKPSKKSYVTLAIVSENITERCLINLLLPFKEVLEKHHSKKIVSKVQEALMHITSG 393
+T E + +++ A N TE C +LL+P+ + L KH +V K+QE + T
Sbjct: 448 QTMEDQGNQRVQAHAAAALINFTEDCPKSLLIPYLDNLVKHLHSIMVLKLQELIQKGTKL 507
Query: 394 LVSNRFIDIESLFVFLHGIASDSIPQFVLGAPK-REITEQQREKMLR 531
++ I S+ +P + L P + I E +K LR
Sbjct: 508 VLEQVVTSIASV---ADTAEEKFVPYYDLFMPSLKHIVENAVQKELR 551
>AL137120-1|CAI16520.1| 1097|Homo sapiens RAN binding protein 5
protein.
Length = 1097
Score = 31.5 bits (68), Expect = 2.5
Identities = 28/107 (26%), Positives = 47/107 (43%), Gaps = 1/107 (0%)
Frame = +1
Query: 214 KTPEAKPSKKSYVTLAIVSENITERCLINLLLPFKEVLEKHHSKKIVSKVQEALMHITSG 393
+T E + +++ A N TE C +LL+P+ + L KH +V K+QE + T
Sbjct: 448 QTMEDQGNQRVQAHAAAALINFTEDCPKSLLIPYLDNLVKHLHSIMVLKLQELIQKGTKL 507
Query: 394 LVSNRFIDIESLFVFLHGIASDSIPQFVLGAPK-REITEQQREKMLR 531
++ I S+ +P + L P + I E +K LR
Sbjct: 508 VLEQVVTSIASV---ADTAEEKFVPYYDLFMPSLKHIVENAVQKELR 551
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 72,011,904
Number of Sequences: 237096
Number of extensions: 1291632
Number of successful extensions: 3593
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 3493
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3591
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6691573490
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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