Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--2335
         (621 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE013599-3404|AAF46853.2| 2733|Drosophila melanogaster CG4554-PA...   170   1e-42
AY094744-1|AAM11097.1|  790|Drosophila melanogaster GM01751p pro...    40   0.002
AY119501-1|AAM50155.1|  348|Drosophila melanogaster GH11358p pro...    29   3.8  
AE013599-3351|AAM68211.1|  348|Drosophila melanogaster CG11170-P...    29   3.8  
BT030437-1|ABO52857.1|  566|Drosophila melanogaster IP18510p pro...    29   6.7  
AE014297-633|AAF53999.2| 1148|Drosophila melanogaster CG34127-PA...    29   6.7  

>AE013599-3404|AAF46853.2| 2733|Drosophila melanogaster CG4554-PA
            protein.
          Length = 2733

 Score =  170 bits (413), Expect = 1e-42
 Identities = 85/191 (44%), Positives = 117/191 (61%)
 Frame = +1

Query: 1    LGVLFEHLTLLLTRGFQXXXXXXXXXXXXXXXKGTFEPGDINANLHYILDVCVNDLFGAL 180
            LG+L E L  LLTRGFQ               K   +P  I   L  +L+V +ND+FG +
Sbjct: 1794 LGMLLEQLQSLLTRGFQVHVLSVTLHGVLDALKSDLKPEHIENCLQNLLEVALNDIFGDV 1853

Query: 181  SEEKEVDKLHYKTPEAKPSKKSYVTLAIVSENITERCLINLLLPFKEVLEKHHSKKIVSK 360
            + EKEV+K+   TPEAKPS KSY+TL I + +I + CL++LLLPFKE L + HS+K+  K
Sbjct: 1854 NAEKEVEKIVAHTPEAKPSAKSYLTLNIAARHIRDNCLLDLLLPFKEHLARSHSRKVTQK 1913

Query: 361  VQEALMHITSGLVSNRFIDIESLFVFLHGIASDSIPQFVLGAPKREITEQQREKMLRAKP 540
            +QE    I  GLV N  I  ESL +F++G  S+SI   + G  KR++TE+++  M R +P
Sbjct: 1914 IQECFAKIVGGLVENTHIARESLLIFIYGTMSESISDLLPGTKKRQLTEKEQALMKRTRP 1973

Query: 541  DCFIVPEAPKR 573
            DC I+  AP R
Sbjct: 1974 DCLILQPAPGR 1984


>AY094744-1|AAM11097.1|  790|Drosophila melanogaster GM01751p
           protein.
          Length = 790

 Score = 40.3 bits (90), Expect = 0.002
 Identities = 17/40 (42%), Positives = 26/40 (65%)
 Frame = +1

Query: 454 SDSIPQFVLGAPKREITEQQREKMLRAKPDCFIVPEAPKR 573
           S+SI   + G  KR++TE+++  M R +PDC I+  AP R
Sbjct: 2   SESISDLLPGTKKRQLTEKEQALMKRTRPDCLILQPAPGR 41


>AY119501-1|AAM50155.1|  348|Drosophila melanogaster GH11358p
           protein.
          Length = 348

 Score = 29.5 bits (63), Expect = 3.8
 Identities = 12/27 (44%), Positives = 17/27 (62%)
 Frame = +1

Query: 487 PKREITEQQREKMLRAKPDCFIVPEAP 567
           P+RE+ ++  EK LR  PDCF+    P
Sbjct: 24  PQREVFQELFEKDLRLCPDCFVGQSEP 50


>AE013599-3351|AAM68211.1|  348|Drosophila melanogaster CG11170-PB
           protein.
          Length = 348

 Score = 29.5 bits (63), Expect = 3.8
 Identities = 12/27 (44%), Positives = 17/27 (62%)
 Frame = +1

Query: 487 PKREITEQQREKMLRAKPDCFIVPEAP 567
           P+RE+ ++  EK LR  PDCF+    P
Sbjct: 24  PQREVFQELFEKDLRLCPDCFVGQSEP 50


>BT030437-1|ABO52857.1|  566|Drosophila melanogaster IP18510p
           protein.
          Length = 566

 Score = 28.7 bits (61), Expect = 6.7
 Identities = 20/66 (30%), Positives = 33/66 (50%)
 Frame = -2

Query: 200 STSFSSDNAPNKSLTQTSRM*WRLAFMSPGSKVPFRASSTACTVATNTCTWNPLVSNKVR 21
           S+S +S + P+ SLT +S         SPGS     +SST+ + + +  +  P  +N   
Sbjct: 83  SSSATSSSVPSLSLTSSSSA----GLSSPGSSSSSSSSSTSTSGSNSNRSSRPTSNNSNS 138

Query: 20  CSNRTP 3
            SN +P
Sbjct: 139 NSNYSP 144


>AE014297-633|AAF53999.2| 1148|Drosophila melanogaster CG34127-PA
           protein.
          Length = 1148

 Score = 28.7 bits (61), Expect = 6.7
 Identities = 20/66 (30%), Positives = 33/66 (50%)
 Frame = -2

Query: 200 STSFSSDNAPNKSLTQTSRM*WRLAFMSPGSKVPFRASSTACTVATNTCTWNPLVSNKVR 21
           S+S +S + P+ SLT +S         SPGS     +SST+ + + +  +  P  +N   
Sbjct: 83  SSSATSSSVPSLSLTSSSSA----GLSSPGSSSSSSSSSTSTSGSNSNRSSRPTSNNSNS 138

Query: 20  CSNRTP 3
            SN +P
Sbjct: 139 NSNYSP 144


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,214,928
Number of Sequences: 53049
Number of extensions: 422378
Number of successful extensions: 1143
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1136
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1143
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2559155400
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)