Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--2333
         (588 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF145649-1|AAD38624.1|  556|Drosophila melanogaster BcDNA.GH0838...   124   1e-28
AE014298-777|AAF46064.1|  556|Drosophila melanogaster CG3149-PA ...   124   1e-28
BT001562-1|AAN71317.1|  753|Drosophila melanogaster RE14391p pro...    28   8.2  
AY051714-1|AAK93138.1|  442|Drosophila melanogaster LD24865p pro...    28   8.2  
AE014296-1245|AAF50571.1|  753|Drosophila melanogaster CG8583-PA...    28   8.2  
AE014296-603|AAF47741.2|  442|Drosophila melanogaster CG12034-PA...    28   8.2  

>AF145649-1|AAD38624.1|  556|Drosophila melanogaster BcDNA.GH08388
           protein.
          Length = 556

 Score =  124 bits (298), Expect = 1e-28
 Identities = 65/133 (48%), Positives = 87/133 (65%)
 Frame = -2

Query: 587 ECYSFAPQ*LSSQLNSYNYLMVIFSVSFLVLSYCLTYIFGPIGFIISNCINMFARIMHSI 408
           E Y FA    S  ++ YNYLM IFSVSFLVLSY LT IFGP+GFI +NCINM +RI++S 
Sbjct: 416 EGYMFATN-TSRDIDKYNYLMAIFSVSFLVLSYILTGIFGPVGFIFANCINMLSRILYST 474

Query: 407 HFIRNKYKDTEYKPLNGLLVGKIFLSTLFIAGFVCKISEIRLFPSFILLHILVGGIMLLC 228
           ++IR++Y+     PL GL  GK+F  TLF+AG VC   +     S +  H+ VG +  L 
Sbjct: 475 YYIRHQYRPLSLDPLLGLWPGKLFGCTLFLAGIVCYWYQ----SSDLATHLGVGVLAGLA 530

Query: 227 VLIAWGYENRELV 189
            L++W   +R+LV
Sbjct: 531 CLLSWALAHRDLV 543


>AE014298-777|AAF46064.1|  556|Drosophila melanogaster CG3149-PA
           protein.
          Length = 556

 Score =  124 bits (298), Expect = 1e-28
 Identities = 65/133 (48%), Positives = 87/133 (65%)
 Frame = -2

Query: 587 ECYSFAPQ*LSSQLNSYNYLMVIFSVSFLVLSYCLTYIFGPIGFIISNCINMFARIMHSI 408
           E Y FA    S  ++ YNYLM IFSVSFLVLSY LT IFGP+GFI +NCINM +RI++S 
Sbjct: 416 EGYMFATN-TSRDIDKYNYLMAIFSVSFLVLSYILTGIFGPVGFIFANCINMLSRILYST 474

Query: 407 HFIRNKYKDTEYKPLNGLLVGKIFLSTLFIAGFVCKISEIRLFPSFILLHILVGGIMLLC 228
           ++IR++Y+     PL GL  GK+F  TLF+AG VC   +     S +  H+ VG +  L 
Sbjct: 475 YYIRHQYRPLSLDPLLGLWPGKLFGCTLFLAGIVCYWYQ----SSDLATHLGVGVLAGLA 530

Query: 227 VLIAWGYENRELV 189
            L++W   +R+LV
Sbjct: 531 CLLSWALAHRDLV 543


>BT001562-1|AAN71317.1|  753|Drosophila melanogaster RE14391p
           protein.
          Length = 753

 Score = 28.3 bits (60), Expect = 8.2
 Identities = 13/44 (29%), Positives = 25/44 (56%)
 Frame = +1

Query: 241 IPPTNMWSNIKEGNKRISDILHTKPAMNNVDKNILPTSKPFKGL 372
           +PPT+  + IK+   R+S +LH      + +K+ +  SK ++ L
Sbjct: 112 VPPTSSQAEIKKAYYRLSKVLHPDKETGD-EKSFMMLSKAYQAL 154


>AY051714-1|AAK93138.1|  442|Drosophila melanogaster LD24865p
           protein.
          Length = 442

 Score = 28.3 bits (60), Expect = 8.2
 Identities = 13/32 (40%), Positives = 20/32 (62%), Gaps = 2/32 (6%)
 Frame = -2

Query: 272 FILLHILVGGIMLLCVLIA--WGYENRELVVK 183
           F+LL  +V G++L CV +A  W Y  R  V++
Sbjct: 392 FLLLKFIVFGVILFCVFMASIWNYMERNGVLQ 423


>AE014296-1245|AAF50571.1|  753|Drosophila melanogaster CG8583-PA
           protein.
          Length = 753

 Score = 28.3 bits (60), Expect = 8.2
 Identities = 13/44 (29%), Positives = 25/44 (56%)
 Frame = +1

Query: 241 IPPTNMWSNIKEGNKRISDILHTKPAMNNVDKNILPTSKPFKGL 372
           +PPT+  + IK+   R+S +LH      + +K+ +  SK ++ L
Sbjct: 112 VPPTSSQAEIKKAYYRLSKVLHPDKETGD-EKSFMMLSKAYQAL 154


>AE014296-603|AAF47741.2|  442|Drosophila melanogaster CG12034-PA
           protein.
          Length = 442

 Score = 28.3 bits (60), Expect = 8.2
 Identities = 13/32 (40%), Positives = 20/32 (62%), Gaps = 2/32 (6%)
 Frame = -2

Query: 272 FILLHILVGGIMLLCVLIA--WGYENRELVVK 183
           F+LL  +V G++L CV +A  W Y  R  V++
Sbjct: 392 FLLLKFIVFGVILFCVFMASIWNYMERNGVLQ 423


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,700,777
Number of Sequences: 53049
Number of extensions: 467965
Number of successful extensions: 909
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 886
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 909
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2358819486
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)