Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--2332
         (684 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q6NL41 Cluster: GH10292p; n=6; Endopterygota|Rep: GH102...    33   6.5  
UniRef50_A0D4L6 Cluster: Chromosome undetermined scaffold_376, w...    33   6.5  

>UniRef50_Q6NL41 Cluster: GH10292p; n=6; Endopterygota|Rep: GH10292p
           - Drosophila melanogaster (Fruit fly)
          Length = 618

 Score = 33.1 bits (72), Expect = 6.5
 Identities = 22/81 (27%), Positives = 39/81 (48%), Gaps = 1/81 (1%)
 Frame = +2

Query: 314 WNFVIFGLNKTNFYGLIINIFIM-YRARTIEVYLGDIGIYFSNYRLVYRVSQKEWIILKH 490
           W   ++ L+  +FY L+I   I  +RA+T  VY+G + +Y     L+     K  +I+  
Sbjct: 460 WGMAMYSLS-CSFYSLVIEYLIQRFRAKT--VYVGGLLVYCIGMALMALTRAKLSVIVFS 516

Query: 491 PIVGLMGTQKINKKYFLGSHW 553
              G+M +      Y L +H+
Sbjct: 517 WTAGIMYSTLFTMPYLLVAHY 537


>UniRef50_A0D4L6 Cluster: Chromosome undetermined scaffold_376,
           whole genome shotgun sequence; n=2; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_376,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 1807

 Score = 33.1 bits (72), Expect = 6.5
 Identities = 14/35 (40%), Positives = 19/35 (54%)
 Frame = +2

Query: 458 VSQKEWIILKHPIVGLMGTQKINKKYFLGSHWWGD 562
           +S   W  + H I+ + G Q+IN KYF     WGD
Sbjct: 418 ISIDSWCAIFHQILKIYGLQRINIKYFRQIPGWGD 452


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 704,617,047
Number of Sequences: 1657284
Number of extensions: 14727440
Number of successful extensions: 30488
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 28870
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30467
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 53305790091
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)