Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--2329
         (660 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_02_0822 + 21549257-21550729,21550776-21550877                       28   5.7  
04_04_0664 - 27066253-27067155,27067242-27067508,27067707-270683...    28   7.6  

>08_02_0822 + 21549257-21550729,21550776-21550877
          Length = 524

 Score = 28.3 bits (60), Expect = 5.7
 Identities = 15/49 (30%), Positives = 21/49 (42%)
 Frame = +2

Query: 392 TVQRPPRP*MRNALLLHGRNRQGYGNYPCGLTRRPTTSKPSWKLPTHLN 538
           T Q  PR       +L   N   + N+P G +     ++P W L  HLN
Sbjct: 475 TSQETPRNDQSLESVLESSNMSNHANFPTGGSVLLLIARPLWPLLYHLN 523


>04_04_0664 -
           27066253-27067155,27067242-27067508,27067707-27068368,
           27068479-27069047,27070011-27070108
          Length = 832

 Score = 27.9 bits (59), Expect = 7.6
 Identities = 18/41 (43%), Positives = 24/41 (58%)
 Frame = +1

Query: 25  KLLKPFPLRKKVNLERVGKLIKLDEFTRTKRSSELKSVSDE 147
           K L    +R+K +LER+ KL K  EF R     E++ VSDE
Sbjct: 546 KALTAICVRRKKSLERIAKLEKDREFLR----HEVERVSDE 582


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,624,188
Number of Sequences: 37544
Number of extensions: 284850
Number of successful extensions: 463
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 463
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 463
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1655832080
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)