Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--2329
         (660 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY052060-1|AAK93484.1|  495|Drosophila melanogaster LP09632p pro...    28   9.8  
AJ295236-1|CAC16735.1|  495|Drosophila melanogaster painting of ...    28   9.8  
AE013599-3935|AAM68326.1|  495|Drosophila melanogaster CG3691-PB...    28   9.8  
AE013599-3934|AAF47254.1|  495|Drosophila melanogaster CG3691-PA...    28   9.8  

>AY052060-1|AAK93484.1|  495|Drosophila melanogaster LP09632p
           protein.
          Length = 495

 Score = 28.3 bits (60), Expect = 9.8
 Identities = 11/29 (37%), Positives = 17/29 (58%)
 Frame = -3

Query: 463 ITLPISAVKQ*CVSHLRAGRPLYCKNCDL 377
           + LPIS   + C+ HL+AG  +    CD+
Sbjct: 158 VVLPISVAPRYCLVHLKAGADVEATICDI 186


>AJ295236-1|CAC16735.1|  495|Drosophila melanogaster painting of
           fourth protein protein.
          Length = 495

 Score = 28.3 bits (60), Expect = 9.8
 Identities = 11/29 (37%), Positives = 17/29 (58%)
 Frame = -3

Query: 463 ITLPISAVKQ*CVSHLRAGRPLYCKNCDL 377
           + LPIS   + C+ HL+AG  +    CD+
Sbjct: 158 VVLPISVAPRYCLVHLKAGADVEATICDI 186


>AE013599-3935|AAM68326.1|  495|Drosophila melanogaster CG3691-PB,
           isoform B protein.
          Length = 495

 Score = 28.3 bits (60), Expect = 9.8
 Identities = 11/29 (37%), Positives = 17/29 (58%)
 Frame = -3

Query: 463 ITLPISAVKQ*CVSHLRAGRPLYCKNCDL 377
           + LPIS   + C+ HL+AG  +    CD+
Sbjct: 158 VVLPISVAPRYCLVHLKAGADVEATICDI 186


>AE013599-3934|AAF47254.1|  495|Drosophila melanogaster CG3691-PA,
           isoform A protein.
          Length = 495

 Score = 28.3 bits (60), Expect = 9.8
 Identities = 11/29 (37%), Positives = 17/29 (58%)
 Frame = -3

Query: 463 ITLPISAVKQ*CVSHLRAGRPLYCKNCDL 377
           + LPIS   + C+ HL+AG  +    CD+
Sbjct: 158 VVLPISVAPRYCLVHLKAGADVEATICDI 186


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,897,098
Number of Sequences: 53049
Number of extensions: 485516
Number of successful extensions: 1016
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 913
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1016
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2827453950
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)