Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--2327
         (629 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2 ...    27   0.13 
EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive pep...    25   0.52 
EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive pep...    23   1.6  
AJ457831-1|CAD29886.1|  249|Tribolium castaneum helix-loop-helix...    23   2.1  
AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory recept...    21   8.5  

>AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2
           protein protein.
          Length = 301

 Score = 27.1 bits (57), Expect = 0.13
 Identities = 17/48 (35%), Positives = 23/48 (47%)
 Frame = -1

Query: 236 PSAANVTSTRSPRDSRP*KPADIFAWKLFQHSENCSSDAMIATTRRGT 93
           P+ A+ T T S   S    PA I ++ L QH   CSS   + +T   T
Sbjct: 203 PTIASATYTNSANSSIW-SPASIDSFTLEQHRSWCSSSQPVLSTTNST 249


>EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive
           peptide receptor 2 protein.
          Length = 354

 Score = 25.0 bits (52), Expect = 0.52
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = -2

Query: 529 GAWPRSRALVWMAW 488
           G+W R+R LV +AW
Sbjct: 156 GSWKRARVLVMLAW 169


>EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive
           peptide receptor 1 protein.
          Length = 374

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = -2

Query: 529 GAWPRSRALVWMAWNF 482
           G+W R+R L+  AW F
Sbjct: 134 GSWKRARYLILAAWFF 149


>AJ457831-1|CAD29886.1|  249|Tribolium castaneum helix-loop-helix
           transcription factor protein.
          Length = 249

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 10/31 (32%), Positives = 15/31 (48%)
 Frame = +2

Query: 500 NQSPTSRPGPRSSQQRQSVMTKLETDLDSKP 592
           N SP+  P P S +    V+ + E   + KP
Sbjct: 215 NYSPSQSPEPESVRPLSLVVRRCEEPTEEKP 245


>AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory receptor
           candidate 1 protein.
          Length = 373

 Score = 21.0 bits (42), Expect = 8.5
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +2

Query: 35  SYIFFKCFSYRNYKYK 82
           SY+ F  F  RN +YK
Sbjct: 145 SYLLFDYFVQRNQEYK 160


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 142,342
Number of Sequences: 336
Number of extensions: 3008
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16188355
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)