Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--2326
(631 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin M... 292 2e-79
AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensor... 292 2e-79
AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin... 292 2e-79
D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin... 290 6e-79
Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical p... 265 2e-71
D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin... 265 2e-71
Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical pr... 264 5e-71
Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical pr... 264 5e-71
D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin... 264 5e-71
U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha ... 262 1e-70
Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical p... 259 1e-69
AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical ... 259 1e-69
Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical pr... 246 1e-65
Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical pr... 244 5e-65
Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical pr... 225 3e-59
AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin... 200 9e-52
Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical pr... 151 5e-37
Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical p... 150 9e-37
Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical pr... 149 1e-36
X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin pr... 147 5e-36
U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory ... 147 5e-36
Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical pr... 144 3e-35
Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical p... 130 1e-30
Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical p... 130 1e-30
Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical p... 83 2e-16
AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin... 83 2e-16
AL161712-9|CAC70134.1| 343|Caenorhabditis elegans Hypothetical ... 32 0.39
AY204179-1|AAO39183.1| 486|Caenorhabditis elegans nuclear recep... 29 2.7
AF078783-3|AAN63404.1| 504|Caenorhabditis elegans Nuclear hormo... 29 2.7
AF078783-2|AAK82901.1| 486|Caenorhabditis elegans Nuclear hormo... 29 2.7
AC199169-10|ABO33258.1| 475|Caenorhabditis elegans Hypothetical... 28 4.8
AF067945-11|AAV28330.1| 1604|Caenorhabditis elegans Mechanosenso... 28 6.3
AF067945-10|AAV28329.1| 1818|Caenorhabditis elegans Mechanosenso... 28 6.3
AF067945-9|AAV28328.1| 1954|Caenorhabditis elegans Mechanosensor... 28 6.3
AF067945-6|AAV28326.1| 1167|Caenorhabditis elegans Mechanosensor... 28 6.3
AF067945-5|AAV28325.1| 1685|Caenorhabditis elegans Mechanosensor... 28 6.3
AF067945-4|AAV28327.1| 1995|Caenorhabditis elegans Mechanosensor... 28 6.3
AF067945-3|AAV28331.1| 2006|Caenorhabditis elegans Mechanosensor... 28 6.3
AF067945-2|AAV28324.1| 2007|Caenorhabditis elegans Mechanosensor... 28 6.3
>U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin
MEC-12 protein.
Length = 450
Score = 292 bits (716), Expect = 2e-79
Identities = 126/145 (86%), Positives = 139/145 (95%)
Frame = +3
Query: 69 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 248
MRE IS+H+GQAGVQIGNACWELYCLEHGIQPDGQMP+DK++GG DDSF+TFFSETG+G+
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGR 60
Query: 249 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 428
HVPRAV VDLEPTV+DE+RTGTYR LFHPEQLITGKEDAANNYARGHYTIGKEI+DL LD
Sbjct: 61 HVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLD 120
Query: 429 RIRKLADQCTGLQGFLIFHSFGGGT 503
RIR+LAD CTGLQGFL+FHSFGGGT
Sbjct: 121 RIRRLADNCTGLQGFLVFHSFGGGT 145
Score = 64.9 bits (151), Expect = 5e-11
Identities = 30/34 (88%), Positives = 31/34 (91%)
Frame = +1
Query: 505 GSGFTSLLMERLFVDYGKKSKLEFGIYPAPQVFT 606
GSGFTSLLMERL VDYGKK+KLEF IYPAPQV T
Sbjct: 146 GSGFTSLLMERLSVDYGKKAKLEFSIYPAPQVST 179
>AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensory
abnormality protein12 protein.
Length = 450
Score = 292 bits (716), Expect = 2e-79
Identities = 126/145 (86%), Positives = 139/145 (95%)
Frame = +3
Query: 69 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 248
MRE IS+H+GQAGVQIGNACWELYCLEHGIQPDGQMP+DK++GG DDSF+TFFSETG+G+
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGR 60
Query: 249 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 428
HVPRAV VDLEPTV+DE+RTGTYR LFHPEQLITGKEDAANNYARGHYTIGKEI+DL LD
Sbjct: 61 HVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLD 120
Query: 429 RIRKLADQCTGLQGFLIFHSFGGGT 503
RIR+LAD CTGLQGFL+FHSFGGGT
Sbjct: 121 RIRRLADNCTGLQGFLVFHSFGGGT 145
Score = 64.9 bits (151), Expect = 5e-11
Identities = 30/34 (88%), Positives = 31/34 (91%)
Frame = +1
Query: 505 GSGFTSLLMERLFVDYGKKSKLEFGIYPAPQVFT 606
GSGFTSLLMERL VDYGKK+KLEF IYPAPQV T
Sbjct: 146 GSGFTSLLMERLSVDYGKKAKLEFSIYPAPQVST 179
>AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin
(tba-3) protein.
Length = 450
Score = 292 bits (716), Expect = 2e-79
Identities = 126/145 (86%), Positives = 139/145 (95%)
Frame = +3
Query: 69 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 248
MRE IS+H+GQAGVQIGNACWELYCLEHGIQPDGQMP+DK++GG DDSF+TFFSETG+G+
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGR 60
Query: 249 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 428
HVPRAV VDLEPTV+DE+RTGTYR LFHPEQLITGKEDAANNYARGHYTIGKEI+DL LD
Sbjct: 61 HVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLD 120
Query: 429 RIRKLADQCTGLQGFLIFHSFGGGT 503
RIR+LAD CTGLQGFL+FHSFGGGT
Sbjct: 121 RIRRLADNCTGLQGFLVFHSFGGGT 145
Score = 64.9 bits (151), Expect = 5e-11
Identities = 30/34 (88%), Positives = 31/34 (91%)
Frame = +1
Query: 505 GSGFTSLLMERLFVDYGKKSKLEFGIYPAPQVFT 606
GSGFTSLLMERL VDYGKK+KLEF IYPAPQV T
Sbjct: 146 GSGFTSLLMERLSVDYGKKAKLEFSIYPAPQVST 179
>D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin
protein.
Length = 449
Score = 290 bits (711), Expect = 6e-79
Identities = 125/144 (86%), Positives = 138/144 (95%)
Frame = +3
Query: 72 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKH 251
RE IS+H+GQAGVQIGNACWELYCLEHGIQPDGQMP+DK++GG DDSF+TFFSETG+G+H
Sbjct: 1 REVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGRH 60
Query: 252 VPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 431
VPRAV VDLEPTV+DE+RTGTYR LFHPEQLITGKEDAANNYARGHYTIGKEI+DL LDR
Sbjct: 61 VPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLDR 120
Query: 432 IRKLADQCTGLQGFLIFHSFGGGT 503
IR+LAD CTGLQGFL+FHSFGGGT
Sbjct: 121 IRRLADNCTGLQGFLVFHSFGGGT 144
Score = 64.9 bits (151), Expect = 5e-11
Identities = 30/34 (88%), Positives = 31/34 (91%)
Frame = +1
Query: 505 GSGFTSLLMERLFVDYGKKSKLEFGIYPAPQVFT 606
GSGFTSLLMERL VDYGKK+KLEF IYPAPQV T
Sbjct: 145 GSGFTSLLMERLSVDYGKKAKLEFSIYPAPQVST 178
>Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical
protein C47B2.3 protein.
Length = 448
Score = 265 bits (649), Expect = 2e-71
Identities = 115/145 (79%), Positives = 133/145 (91%)
Frame = +3
Query: 69 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 248
MRE IS+HVGQAGVQIGNACWELYCLEHGIQPDG MPT T G +SF TFFS+TG+G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPTQSTNEG--ESFTTFFSDTGSGR 58
Query: 249 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 428
+VPR++FVDLEPTVVDE+RTGTY++LFHPEQ+ITGKEDAANNYARGHYT+GKE++D VLD
Sbjct: 59 YVPRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLD 118
Query: 429 RIRKLADQCTGLQGFLIFHSFGGGT 503
RIR+LAD C+GLQGF +FHSFGGGT
Sbjct: 119 RIRRLADNCSGLQGFFVFHSFGGGT 143
Score = 66.1 bits (154), Expect = 2e-11
Identities = 31/34 (91%), Positives = 31/34 (91%)
Frame = +1
Query: 505 GSGFTSLLMERLFVDYGKKSKLEFGIYPAPQVFT 606
GSGFTSLLMERL VDYGKKSKLEF IYPAPQV T
Sbjct: 144 GSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVST 177
>D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin
protein.
Length = 448
Score = 265 bits (649), Expect = 2e-71
Identities = 115/145 (79%), Positives = 133/145 (91%)
Frame = +3
Query: 69 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 248
MRE IS+HVGQAGVQIGNACWELYCLEHGIQPDG MPT T G +SF TFFS+TG+G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPTQSTNEG--ESFTTFFSDTGSGR 58
Query: 249 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 428
+VPR++FVDLEPTVVDE+RTGTY++LFHPEQ+ITGKEDAANNYARGHYT+GKE++D VLD
Sbjct: 59 YVPRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLD 118
Query: 429 RIRKLADQCTGLQGFLIFHSFGGGT 503
RIR+LAD C+GLQGF +FHSFGGGT
Sbjct: 119 RIRRLADNCSGLQGFFVFHSFGGGT 143
Score = 66.1 bits (154), Expect = 2e-11
Identities = 31/34 (91%), Positives = 31/34 (91%)
Frame = +1
Query: 505 GSGFTSLLMERLFVDYGKKSKLEFGIYPAPQVFT 606
GSGFTSLLMERL VDYGKKSKLEF IYPAPQV T
Sbjct: 144 GSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVST 177
>Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical
protein F26E4.8 protein.
Length = 449
Score = 264 bits (646), Expect = 5e-71
Identities = 114/145 (78%), Positives = 133/145 (91%)
Frame = +3
Query: 69 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 248
MRE IS+HVGQAGVQIGNACWELYCLEHGIQPDG MP+D+ G +SF TFFS+TG G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSDQQADG--ESFTTFFSDTGNGR 58
Query: 249 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 428
+VPR++FVDLEPTVVDE+RTGTY++LFHPEQ+ITGKEDAANNYARGHYT+GKE++D VLD
Sbjct: 59 YVPRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLD 118
Query: 429 RIRKLADQCTGLQGFLIFHSFGGGT 503
RIR+LAD C+GLQGF +FHSFGGGT
Sbjct: 119 RIRRLADNCSGLQGFFVFHSFGGGT 143
Score = 66.1 bits (154), Expect = 2e-11
Identities = 31/34 (91%), Positives = 31/34 (91%)
Frame = +1
Query: 505 GSGFTSLLMERLFVDYGKKSKLEFGIYPAPQVFT 606
GSGFTSLLMERL VDYGKKSKLEF IYPAPQV T
Sbjct: 144 GSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVST 177
>Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical
protein F16D3.1 protein.
Length = 447
Score = 264 bits (646), Expect = 5e-71
Identities = 113/145 (77%), Positives = 131/145 (90%)
Frame = +3
Query: 69 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 248
MRE +S+H+GQAGVQIGNACWELYCLEHGI PDG MP D + G D S+NTFFSET +GK
Sbjct: 1 MREIVSIHIGQAGVQIGNACWELYCLEHGITPDGLMPDDTSYGVEDQSYNTFFSETPSGK 60
Query: 249 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 428
HVPRA+FVDLEPTV+DEVRTGTY +LFHPEQLI+GKEDAANNYARGHYTIGKE++D+V+D
Sbjct: 61 HVPRAIFVDLEPTVIDEVRTGTYAKLFHPEQLISGKEDAANNYARGHYTIGKELIDVVMD 120
Query: 429 RIRKLADQCTGLQGFLIFHSFGGGT 503
R+R+L ++C LQGFLIFHSFGGGT
Sbjct: 121 RVRRLTERCQSLQGFLIFHSFGGGT 145
Score = 62.9 bits (146), Expect = 2e-10
Identities = 27/34 (79%), Positives = 31/34 (91%)
Frame = +1
Query: 505 GSGFTSLLMERLFVDYGKKSKLEFGIYPAPQVFT 606
GSGFTSL+MERL +DYGKK+KLEF IYPAPQ+ T
Sbjct: 146 GSGFTSLVMERLSIDYGKKAKLEFSIYPAPQIST 179
>D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin
protein.
Length = 449
Score = 264 bits (646), Expect = 5e-71
Identities = 114/145 (78%), Positives = 133/145 (91%)
Frame = +3
Query: 69 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 248
MRE IS+HVGQAGVQIGNACWELYCLEHGIQPDG MP+D+ G +SF TFFS+TG G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSDQQADG--ESFTTFFSDTGNGR 58
Query: 249 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 428
+VPR++FVDLEPTVVDE+RTGTY++LFHPEQ+ITGKEDAANNYARGHYT+GKE++D VLD
Sbjct: 59 YVPRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLD 118
Query: 429 RIRKLADQCTGLQGFLIFHSFGGGT 503
RIR+LAD C+GLQGF +FHSFGGGT
Sbjct: 119 RIRRLADNCSGLQGFFVFHSFGGGT 143
Score = 66.1 bits (154), Expect = 2e-11
Identities = 31/34 (91%), Positives = 31/34 (91%)
Frame = +1
Query: 505 GSGFTSLLMERLFVDYGKKSKLEFGIYPAPQVFT 606
GSGFTSLLMERL VDYGKKSKLEF IYPAPQV T
Sbjct: 144 GSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVCT 177
>U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha
protein 9 protein.
Length = 456
Score = 262 bits (643), Expect = 1e-70
Identities = 112/146 (76%), Positives = 131/146 (89%)
Frame = +3
Query: 66 KMRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAG 245
+ RE IS+HVGQAGVQ+GNACWELYCLEHGIQPDG + + ++G DDSFNTFFSET AG
Sbjct: 5 RSREVISIHVGQAGVQMGNACWELYCLEHGIQPDGMINEEDSLGVDDDSFNTFFSETMAG 64
Query: 246 KHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVL 425
KHVPRA+ VDLEPT +DE+RTGTY+ LFHPEQL+TGKEDAANNYARGHYTIGKEI+D+V+
Sbjct: 65 KHVPRAIMVDLEPTPIDEIRTGTYKTLFHPEQLLTGKEDAANNYARGHYTIGKEIIDVVM 124
Query: 426 DRIRKLADQCTGLQGFLIFHSFGGGT 503
DR+R+L + C GLQGFL+FHSFGGGT
Sbjct: 125 DRVRRLVENCRGLQGFLVFHSFGGGT 150
Score = 63.7 bits (148), Expect = 1e-10
Identities = 30/34 (88%), Positives = 31/34 (91%)
Frame = +1
Query: 505 GSGFTSLLMERLFVDYGKKSKLEFGIYPAPQVFT 606
GSGFT+LLMERL VDYGKKSKLEF IYPAPQV T
Sbjct: 151 GSGFTALLMERLSVDYGKKSKLEFCIYPAPQVST 184
>Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 259 bits (634), Expect = 1e-69
Identities = 112/145 (77%), Positives = 131/145 (90%)
Frame = +3
Query: 69 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 248
MRE IS+HVGQAGVQIGNACWELYCLEHGIQPDG MP+++ GG SF TFFS+TG G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSEQQNEGG--SFTTFFSDTGNGR 58
Query: 249 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 428
+VPR++FVDLEPTVVDE+RTG Y++LFHPEQ+ITGKEDAANNYARGHYT+GKE++D LD
Sbjct: 59 YVPRSIFVDLEPTVVDEIRTGNYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTTLD 118
Query: 429 RIRKLADQCTGLQGFLIFHSFGGGT 503
RIR+LAD C+GLQGF +FHSFGGGT
Sbjct: 119 RIRRLADNCSGLQGFFVFHSFGGGT 143
Score = 66.1 bits (154), Expect = 2e-11
Identities = 31/34 (91%), Positives = 31/34 (91%)
Frame = +1
Query: 505 GSGFTSLLMERLFVDYGKKSKLEFGIYPAPQVFT 606
GSGFTSLLMERL VDYGKKSKLEF IYPAPQV T
Sbjct: 144 GSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVST 177
>AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 259 bits (634), Expect = 1e-69
Identities = 112/145 (77%), Positives = 131/145 (90%)
Frame = +3
Query: 69 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 248
MRE IS+HVGQAGVQIGNACWELYCLEHGIQPDG MP+++ GG SF TFFS+TG G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSEQQNEGG--SFTTFFSDTGNGR 58
Query: 249 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 428
+VPR++FVDLEPTVVDE+RTG Y++LFHPEQ+ITGKEDAANNYARGHYT+GKE++D LD
Sbjct: 59 YVPRSIFVDLEPTVVDEIRTGNYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTTLD 118
Query: 429 RIRKLADQCTGLQGFLIFHSFGGGT 503
RIR+LAD C+GLQGF +FHSFGGGT
Sbjct: 119 RIRRLADNCSGLQGFFVFHSFGGGT 143
Score = 66.1 bits (154), Expect = 2e-11
Identities = 31/34 (91%), Positives = 31/34 (91%)
Frame = +1
Query: 505 GSGFTSLLMERLFVDYGKKSKLEFGIYPAPQVFT 606
GSGFTSLLMERL VDYGKKSKLEF IYPAPQV T
Sbjct: 144 GSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVST 177
>Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical
protein T28D6.2 protein.
Length = 444
Score = 246 bits (601), Expect = 1e-65
Identities = 108/145 (74%), Positives = 123/145 (84%)
Frame = +3
Query: 69 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 248
MRE IS+HVGQAGVQIGNACWELYCLEHGI PDG T G S TFFS+TG G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGILPDG---TSMEPDGNSGSLGTFFSDTGYGR 57
Query: 249 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 428
HVPR++FVDLEPTVVDE+RTG Y++LFHPEQ++TGKEDAANNYARGHYT+GKEI+D LD
Sbjct: 58 HVPRSIFVDLEPTVVDEIRTGAYKKLFHPEQMLTGKEDAANNYARGHYTVGKEIIDTTLD 117
Query: 429 RIRKLADQCTGLQGFLIFHSFGGGT 503
RIR+LA+ C GLQGF +FHSFGGGT
Sbjct: 118 RIRRLANNCEGLQGFFVFHSFGGGT 142
Score = 61.7 bits (143), Expect = 4e-10
Identities = 27/34 (79%), Positives = 30/34 (88%)
Frame = +1
Query: 505 GSGFTSLLMERLFVDYGKKSKLEFGIYPAPQVFT 606
GSGFTS+LMERL +YGKKSKLEF IYPAPQ+ T
Sbjct: 143 GSGFTSMLMERLSAEYGKKSKLEFSIYPAPQIST 176
>Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical
protein F32H2.9 protein.
Length = 464
Score = 244 bits (596), Expect = 5e-65
Identities = 106/144 (73%), Positives = 124/144 (86%)
Frame = +3
Query: 72 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKH 251
RE IS+HVGQAGVQIGNACWEL+CLEHGIQPDG D T ++ NTFF+ET GKH
Sbjct: 8 REVISIHVGQAGVQIGNACWELFCLEHGIQPDGYHVEDDTYDEETETINTFFAETAGGKH 67
Query: 252 VPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 431
VPR +FVDLEPTVVDEVRTGTYR LFHPEQL++GKEDAAN YARG YTIG+E++D+V+DR
Sbjct: 68 VPRCLFVDLEPTVVDEVRTGTYRSLFHPEQLLSGKEDAANCYARGRYTIGREMIDVVMDR 127
Query: 432 IRKLADQCTGLQGFLIFHSFGGGT 503
+++LA+ C GLQGF+IFHSFGGGT
Sbjct: 128 VKRLAENCNGLQGFVIFHSFGGGT 151
Score = 58.4 bits (135), Expect = 4e-09
Identities = 27/34 (79%), Positives = 28/34 (82%)
Frame = +1
Query: 505 GSGFTSLLMERLFVDYGKKSKLEFGIYPAPQVFT 606
GSGF SLLMERL +YGKK KLEF IYPAPQV T
Sbjct: 152 GSGFLSLLMERLSTEYGKKPKLEFAIYPAPQVST 185
>Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical
protein ZK899.4 protein.
Length = 452
Score = 225 bits (549), Expect = 3e-59
Identities = 96/144 (66%), Positives = 116/144 (80%)
Frame = +3
Query: 72 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKH 251
REC+S+H+GQAG QIGNACWELYC+EHG+ G + ++ S FFSE+ GKH
Sbjct: 6 RECVSIHIGQAGAQIGNACWELYCIEHGLDEAGFLKEEEK-NKKQQSLQAFFSESMNGKH 64
Query: 252 VPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 431
VPRA++VDLEPTV+DE+R G Y LFHP+Q+I GKEDAANNYARGHYTIGKE++D+VLDR
Sbjct: 65 VPRAIYVDLEPTVLDEIRNGVYGNLFHPDQIINGKEDAANNYARGHYTIGKELIDVVLDR 124
Query: 432 IRKLADQCTGLQGFLIFHSFGGGT 503
IRK + C GLQGFL+FHSFGGGT
Sbjct: 125 IRKQTENCEGLQGFLVFHSFGGGT 148
Score = 60.9 bits (141), Expect = 7e-10
Identities = 27/34 (79%), Positives = 31/34 (91%)
Frame = +1
Query: 505 GSGFTSLLMERLFVDYGKKSKLEFGIYPAPQVFT 606
GSGF+SLLMERL V++GKKSKLEF +YPAPQV T
Sbjct: 149 GSGFSSLLMERLSVEFGKKSKLEFSVYPAPQVST 182
>AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin
(tba-6) protein.
Length = 435
Score = 200 bits (487), Expect = 9e-52
Identities = 86/123 (69%), Positives = 104/123 (84%)
Frame = +3
Query: 135 LYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGT 314
++CLEHGIQPDG D T ++ NTFF+ET GKHVPR +FVDLEPTVVDEVRTGT
Sbjct: 1 MFCLEHGIQPDGYHVEDDTYDEETETINTFFAETAGGKHVPRCLFVDLEPTVVDEVRTGT 60
Query: 315 YRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHSFG 494
YR LFHPEQL++GKEDAAN YARG YTIG+E++D+V+DR+++LA+ C GLQGF+IFHSFG
Sbjct: 61 YRSLFHPEQLLSGKEDAANCYARGRYTIGREMIDVVMDRVKRLAENCNGLQGFVIFHSFG 120
Query: 495 GGT 503
GGT
Sbjct: 121 GGT 123
Score = 58.4 bits (135), Expect = 4e-09
Identities = 27/34 (79%), Positives = 28/34 (82%)
Frame = +1
Query: 505 GSGFTSLLMERLFVDYGKKSKLEFGIYPAPQVFT 606
GSGF SLLMERL +YGKK KLEF IYPAPQV T
Sbjct: 124 GSGFLSLLMERLSTEYGKKPKLEFAIYPAPQVST 157
>Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical
protein C54C6.2 protein.
Length = 444
Score = 151 bits (365), Expect = 5e-37
Identities = 72/145 (49%), Positives = 93/145 (64%)
Frame = +3
Query: 69 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 248
MRE + V GQ G QIG WE+ EHGIQPDG + + + N +++E GK
Sbjct: 1 MREIVHVQAGQCGNQIGAKFWEVISDEHGIQPDGTYKGESDLQL--ERINVYYNEANGGK 58
Query: 249 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 428
+VPRAV VDLEP +D VR+G + QLF P+ + G+ A NN+A+GHYT G E+VD VLD
Sbjct: 59 YVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLD 118
Query: 429 RIRKLADQCTGLQGFLIFHSFGGGT 503
+RK A+ C LQGF + HS GGGT
Sbjct: 119 VVRKEAEGCDCLQGFQLTHSLGGGT 143
>Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical
protein K01G5.7 protein.
Length = 449
Score = 150 bits (363), Expect = 9e-37
Identities = 72/145 (49%), Positives = 94/145 (64%)
Frame = +3
Query: 69 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 248
MRE + V GQ G QIG+ WE+ EHGIQPDG + + + + +++E GK
Sbjct: 1 MREIVHVQAGQCGNQIGSKFWEVISDEHGIQPDGTFKGESDLQL--ERIDVYYNEANNGK 58
Query: 249 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 428
+VPRAV VDLEP +D VR+G + QLF P+ + G+ A NN+A+GHYT G E+VD VLD
Sbjct: 59 YVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLD 118
Query: 429 RIRKLADQCTGLQGFLIFHSFGGGT 503
IRK A+ C LQGF + HS GGGT
Sbjct: 119 VIRKEAEGCDCLQGFQLTHSLGGGT 143
>Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical
protein C36E8.5 protein.
Length = 450
Score = 149 bits (362), Expect = 1e-36
Identities = 72/145 (49%), Positives = 94/145 (64%)
Frame = +3
Query: 69 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 248
MRE + V GQ G QIG+ WE+ EHGIQPDG + + + + +++E GK
Sbjct: 1 MREIVHVQAGQCGNQIGSKFWEVISDEHGIQPDGTFKGETDLQL--ERIDVYYNEANNGK 58
Query: 249 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 428
+VPRAV VDLEP +D VR+G + QLF P+ + G+ A NN+A+GHYT G E+VD VLD
Sbjct: 59 YVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLD 118
Query: 429 RIRKLADQCTGLQGFLIFHSFGGGT 503
IRK A+ C LQGF + HS GGGT
Sbjct: 119 VIRKEAEGCDCLQGFQLTHSLGGGT 143
>X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin
protein.
Length = 441
Score = 147 bits (357), Expect = 5e-36
Identities = 70/145 (48%), Positives = 93/145 (64%)
Frame = +3
Query: 69 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 248
MRE + + GQ G QIG+ WE+ EHGI P GQ D + + N +++E G+ K
Sbjct: 1 MREIVHIQAGQCGNQIGSKFWEVISDEHGIDPSGQYVGDSDLQL--ERINVYYNEAGSNK 58
Query: 249 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 428
+VPRAV VDLEP +D VR+G + QLF P+ + G+ A NN+A+GHYT G E+VD VLD
Sbjct: 59 YVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNYVFGQSGAGNNWAKGHYTEGAELVDNVLD 118
Query: 429 RIRKLADQCTGLQGFLIFHSFGGGT 503
+RK A+ LQGF + HS GGGT
Sbjct: 119 VVRKEAESTDCLQGFQLTHSLGGGT 143
>U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory
abnormality protein7 protein.
Length = 441
Score = 147 bits (357), Expect = 5e-36
Identities = 70/145 (48%), Positives = 93/145 (64%)
Frame = +3
Query: 69 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 248
MRE + + GQ G QIG+ WE+ EHGI P GQ D + + N +++E G+ K
Sbjct: 1 MREIVHIQAGQCGNQIGSKFWEVISDEHGIDPSGQYVGDSDLQL--ERINVYYNEAGSNK 58
Query: 249 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 428
+VPRAV VDLEP +D VR+G + QLF P+ + G+ A NN+A+GHYT G E+VD VLD
Sbjct: 59 YVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNYVFGQSGAGNNWAKGHYTEGAELVDNVLD 118
Query: 429 RIRKLADQCTGLQGFLIFHSFGGGT 503
+RK A+ LQGF + HS GGGT
Sbjct: 119 VVRKEAESTDCLQGFQLTHSLGGGT 143
>Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical
protein B0272.1 protein.
Length = 444
Score = 144 bits (350), Expect = 3e-35
Identities = 69/145 (47%), Positives = 89/145 (61%)
Frame = +3
Query: 69 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 248
MRE + + GQ G QIG WE+ EHGI P G D + + N +++E GK
Sbjct: 1 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGAYNGDSDLQL--ERINVYYNEASGGK 58
Query: 249 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 428
+VPRA VDLEP +D VR G + QLF P+ + G+ A NN+A+GHYT G E+VD VLD
Sbjct: 59 YVPRACLVDLEPGTMDSVRAGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLD 118
Query: 429 RIRKLADQCTGLQGFLIFHSFGGGT 503
+RK A+ C LQGF + HS GGGT
Sbjct: 119 VVRKEAESCDCLQGFQMTHSLGGGT 143
>Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 130 bits (313), Expect = 1e-30
Identities = 64/145 (44%), Positives = 88/145 (60%)
Frame = +3
Query: 69 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 248
M+E I+V VGQ G QIG WE EHG+Q DG D G + +++ E K
Sbjct: 1 MKEIINVQVGQCGNQIGAKFWEYISEEHGLQTDGTYKGDN--GSQLERITSYYKEMEGRK 58
Query: 249 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 428
+VPRA+ VDL+P ++ VR+ Y +LF PE ++G+ A NN++RG+Y G EIVD VL
Sbjct: 59 YVPRAILVDLDPESINYVRSTQYGKLFDPENAVSGESGAGNNWSRGYYEQGAEIVDKVLS 118
Query: 429 RIRKLADQCTGLQGFLIFHSFGGGT 503
IR+ A+ L+GF + HS GGGT
Sbjct: 119 VIRREAEAADSLEGFQLIHSLGGGT 143
>Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 130 bits (313), Expect = 1e-30
Identities = 64/145 (44%), Positives = 88/145 (60%)
Frame = +3
Query: 69 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 248
M+E I+V VGQ G QIG WE EHG+Q DG D G + +++ E K
Sbjct: 1 MKEIINVQVGQCGNQIGAKFWEYISEEHGLQTDGTYKGDN--GSQLERITSYYKEMEGRK 58
Query: 249 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 428
+VPRA+ VDL+P ++ VR+ Y +LF PE ++G+ A NN++RG+Y G EIVD VL
Sbjct: 59 YVPRAILVDLDPESINYVRSTQYGKLFDPENAVSGESGAGNNWSRGYYEQGAEIVDKVLS 118
Query: 429 RIRKLADQCTGLQGFLIFHSFGGGT 503
IR+ A+ L+GF + HS GGGT
Sbjct: 119 VIRREAEAADSLEGFQLIHSLGGGT 143
>Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical
protein F58A4.8 protein.
Length = 444
Score = 82.6 bits (195), Expect = 2e-16
Identities = 49/144 (34%), Positives = 76/144 (52%), Gaps = 3/144 (2%)
Frame = +3
Query: 81 ISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPR 260
++VHVGQ G Q+ A W+ EHGI GQ + + +D + F + +VPR
Sbjct: 8 MTVHVGQCGNQLAQAFWKSMVDEHGINERGQTTHEDDM---NDKKDLLFYQADDDHYVPR 64
Query: 261 AVFVDLEPTVVD-EVRTGTYRQLFHPEQLITGKE--DAANNYARGHYTIGKEIVDLVLDR 431
AV VDLEP V++ +++ + LF+ + + A NN+A G Y G+E+ + ++D
Sbjct: 65 AVLVDLEPRVINGMMQSPNFSNLFNTDNIFMSDHGGGAGNNWASG-YCQGQEVQEKIMDI 123
Query: 432 IRKLADQCTGLQGFLIFHSFGGGT 503
I + A+ L G L HS GGT
Sbjct: 124 IIREAENTNNLDGILFTHSVSGGT 147
>AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin
protein.
Length = 444
Score = 82.6 bits (195), Expect = 2e-16
Identities = 49/144 (34%), Positives = 76/144 (52%), Gaps = 3/144 (2%)
Frame = +3
Query: 81 ISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPR 260
++VHVGQ G Q+ A W+ EHGI GQ + + +D + F + +VPR
Sbjct: 8 MTVHVGQCGNQLAQAFWKSMVDEHGINERGQTTHEDDM---NDKKDLLFYQADDDHYVPR 64
Query: 261 AVFVDLEPTVVD-EVRTGTYRQLFHPEQLITGKE--DAANNYARGHYTIGKEIVDLVLDR 431
AV VDLEP V++ +++ + LF+ + + A NN+A G Y G+E+ + ++D
Sbjct: 65 AVLVDLEPRVINGMMQSPNFSNLFNTDNIFMSDHGGGAGNNWASG-YCQGQEVQEKIMDI 123
Query: 432 IRKLADQCTGLQGFLIFHSFGGGT 503
I + A+ L G L HS GGT
Sbjct: 124 IIREAENTNNLDGILFTHSVSGGT 147
>AL161712-9|CAC70134.1| 343|Caenorhabditis elegans Hypothetical
protein Y66D12A.12 protein.
Length = 343
Score = 31.9 bits (69), Expect = 0.39
Identities = 18/52 (34%), Positives = 31/52 (59%)
Frame = +1
Query: 97 AKPESRSVMPAGSFTAWSTASSLMARCPQTRPSGVETILSTLSSARPELAST 252
A P MP+ S + S++SS M + P+ PS ++T+L+++ + E AST
Sbjct: 189 ATPALLPFMPSSSTFSASSSSSEMEQTPE--PSSLDTVLTSMMNNNEEAAST 238
>AY204179-1|AAO39183.1| 486|Caenorhabditis elegans nuclear receptor
NHR-80 protein.
Length = 486
Score = 29.1 bits (62), Expect = 2.7
Identities = 18/63 (28%), Positives = 29/63 (46%)
Frame = +3
Query: 111 QIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTV 290
QI +C CL +G++P G P I G FF+++G ++ F ++ P
Sbjct: 63 QICRSCRHKKCLSNGMKPGGVQPKKPNIETG----RAFFTKSGLKRN---KKFANVSPQT 115
Query: 291 VDE 299
DE
Sbjct: 116 ADE 118
>AF078783-3|AAN63404.1| 504|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 80, isoform b protein.
Length = 504
Score = 29.1 bits (62), Expect = 2.7
Identities = 18/63 (28%), Positives = 29/63 (46%)
Frame = +3
Query: 111 QIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTV 290
QI +C CL +G++P G P I G FF+++G ++ F ++ P
Sbjct: 81 QICRSCRHKKCLSNGMKPGGVQPKKPNIETG----RAFFTKSGLKRN---KKFANVSPQT 133
Query: 291 VDE 299
DE
Sbjct: 134 ADE 136
>AF078783-2|AAK82901.1| 486|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 80, isoform a protein.
Length = 486
Score = 29.1 bits (62), Expect = 2.7
Identities = 18/63 (28%), Positives = 29/63 (46%)
Frame = +3
Query: 111 QIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTV 290
QI +C CL +G++P G P I G FF+++G ++ F ++ P
Sbjct: 63 QICRSCRHKKCLSNGMKPGGVQPKKPNIETG----RAFFTKSGLKRN---KKFANVSPQT 115
Query: 291 VDE 299
DE
Sbjct: 116 ADE 118
>AC199169-10|ABO33258.1| 475|Caenorhabditis elegans Hypothetical
protein F38A1.7 protein.
Length = 475
Score = 28.3 bits (60), Expect = 4.8
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = -3
Query: 359 FLTSNKLFWMKQLSVCASADLINNSRFKIDED 264
FL K F K ++VC S LI R+ DED
Sbjct: 232 FLNFQKFFNNKDVTVCGSVCLILEKRYPNDED 263
>AF067945-11|AAV28330.1| 1604|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform g protein.
Length = 1604
Score = 27.9 bits (59), Expect = 6.3
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +3
Query: 288 VVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 431
VV +++TG + PE+ + E A+N+Y + Y + K V ++D+
Sbjct: 625 VVHDMKTGEHPGYTKPEEFVRRIESASNDYIK--YDLQKPDVVTIIDK 670
>AF067945-10|AAV28329.1| 1818|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform f protein.
Length = 1818
Score = 27.9 bits (59), Expect = 6.3
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +3
Query: 288 VVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 431
VV +++TG + PE+ + E A+N+Y + Y + K V ++D+
Sbjct: 839 VVHDMKTGEHPGYTKPEEFVRRIESASNDYIK--YDLQKPDVVTIIDK 884
>AF067945-9|AAV28328.1| 1954|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform e protein.
Length = 1954
Score = 27.9 bits (59), Expect = 6.3
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +3
Query: 288 VVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 431
VV +++TG + PE+ + E A+N+Y + Y + K V ++D+
Sbjct: 975 VVHDMKTGEHPGYTKPEEFVRRIESASNDYIK--YDLQKPDVVTIIDK 1020
>AF067945-6|AAV28326.1| 1167|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform c protein.
Length = 1167
Score = 27.9 bits (59), Expect = 6.3
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +3
Query: 288 VVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 431
VV +++TG + PE+ + E A+N+Y + Y + K V ++D+
Sbjct: 1024 VVHDMKTGEHPGYTKPEEFVRRIESASNDYIK--YDLQKPDVVTIIDK 1069
>AF067945-5|AAV28325.1| 1685|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform b protein.
Length = 1685
Score = 27.9 bits (59), Expect = 6.3
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +3
Query: 288 VVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 431
VV +++TG + PE+ + E A+N+Y + Y + K V ++D+
Sbjct: 1024 VVHDMKTGEHPGYTKPEEFVRRIESASNDYIK--YDLQKPDVVTIIDK 1069
>AF067945-4|AAV28327.1| 1995|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform d protein.
Length = 1995
Score = 27.9 bits (59), Expect = 6.3
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +3
Query: 288 VVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 431
VV +++TG + PE+ + E A+N+Y + Y + K V ++D+
Sbjct: 1016 VVHDMKTGEHPGYTKPEEFVRRIESASNDYIK--YDLQKPDVVTIIDK 1061
>AF067945-3|AAV28331.1| 2006|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform h protein.
Length = 2006
Score = 27.9 bits (59), Expect = 6.3
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +3
Query: 288 VVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 431
VV +++TG + PE+ + E A+N+Y + Y + K V ++D+
Sbjct: 1027 VVHDMKTGEHPGYTKPEEFVRRIESASNDYIK--YDLQKPDVVTIIDK 1072
>AF067945-2|AAV28324.1| 2007|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform a protein.
Length = 2007
Score = 27.9 bits (59), Expect = 6.3
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +3
Query: 288 VVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 431
VV +++TG + PE+ + E A+N+Y + Y + K V ++D+
Sbjct: 1028 VVHDMKTGEHPGYTKPEEFVRRIESASNDYIK--YDLQKPDVVTIIDK 1073
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,819,126
Number of Sequences: 27780
Number of extensions: 362602
Number of successful extensions: 953
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 866
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 931
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1385109898
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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