Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--2325
         (680 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory recept...    22   4.0  
AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory recept...    22   4.0  
AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory recept...    22   4.0  
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    21   9.3  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    21   9.3  

>AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory receptor
           candidate 30 protein.
          Length = 394

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 10/36 (27%), Positives = 15/36 (41%)
 Frame = +1

Query: 130 VMSLLKLFLFAFFINDSLCLTPQCRNEKGEPIDWFY 237
           V   L L  +     + L L  +C N   E  D+F+
Sbjct: 159 VFMSLALIEYILMQTNKLVLALECNNSTSEGFDYFF 194


>AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory receptor
           candidate 29 protein.
          Length = 429

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 10/36 (27%), Positives = 15/36 (41%)
 Frame = +1

Query: 130 VMSLLKLFLFAFFINDSLCLTPQCRNEKGEPIDWFY 237
           V   L L  +     + L L  +C N   E  D+F+
Sbjct: 159 VFMSLALIEYILMQTNKLVLALECNNSTSEGFDYFF 194


>AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory receptor
           candidate 7 protein.
          Length = 429

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 10/36 (27%), Positives = 15/36 (41%)
 Frame = +1

Query: 130 VMSLLKLFLFAFFINDSLCLTPQCRNEKGEPIDWFY 237
           V   L L  +     + L L  +C N   E  D+F+
Sbjct: 159 VFMSLALIEYILMQTNKLVLALECNNSTSEGFDYFF 194


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 9/30 (30%), Positives = 17/30 (56%)
 Frame = -2

Query: 514 DLFCFLNTYRRQIVIYRVGTQLLAAGHCIQ 425
           D++  LNT+R ++V   +G + +    C Q
Sbjct: 595 DVYTRLNTHRDRLVARGLGAEAMWPVWCAQ 624


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 8/23 (34%), Positives = 15/23 (65%)
 Frame = -2

Query: 514 DLFCFLNTYRRQIVIYRVGTQLL 446
           DLF  L  Y+  ++ + +G+QL+
Sbjct: 365 DLFNSLFGYQTLLITFHIGSQLV 387


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 164,572
Number of Sequences: 336
Number of extensions: 3422
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17801955
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)