Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--2323
         (523 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate neu...    25   0.31 
AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2 ...    24   0.71 
AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    22   2.9  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   3.8  
AJ005422-1|CAA06528.1|  287|Tribolium castaneum caudal protein p...    22   3.8  
AJ005421-1|CAA06527.1|  249|Tribolium castaneum caudal protein p...    22   3.8  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    22   3.8  
DQ855490-1|ABH88177.1|  133|Tribolium castaneum chemosensory pro...    21   8.7  
DQ659249-1|ABG47447.1|  383|Tribolium castaneum chitinase 9 prot...    21   8.7  

>AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate
           neuroblasts defectiveprotein protein.
          Length = 224

 Score = 25.4 bits (53), Expect = 0.31
 Identities = 11/21 (52%), Positives = 13/21 (61%)
 Frame = +1

Query: 112 KPSDANFCCCWRSTCVSSTSP 174
           K S+ N CCC R TC S+  P
Sbjct: 183 KASNGNKCCCLR-TCSSAKRP 202


>AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2
           protein protein.
          Length = 301

 Score = 24.2 bits (50), Expect = 0.71
 Identities = 11/29 (37%), Positives = 16/29 (55%)
 Frame = -1

Query: 130 SSRPTASFPCILATYLNSGFPGMWTPGSL 44
           S+  T+S     ATY NS    +W+P S+
Sbjct: 196 STGSTSSPTIASATYTNSANSSIWSPASI 224


>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 22.2 bits (45), Expect = 2.9
 Identities = 11/26 (42%), Positives = 13/26 (50%)
 Frame = -1

Query: 79  SGFPGMWTPGSLVTSSTYNSLPCTDL 2
           S  P + TP  L  S  +NSLP   L
Sbjct: 458 SQVPALSTPNLLSLSLAFNSLPTVAL 483


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 21.8 bits (44), Expect = 3.8
 Identities = 7/17 (41%), Positives = 9/17 (52%)
 Frame = +1

Query: 121 DANFCCCWRSTCVSSTS 171
           D N+  CW+S C    S
Sbjct: 755 DWNYPVCWQSNCKKGAS 771


>AJ005422-1|CAA06528.1|  287|Tribolium castaneum caudal protein
           protein.
          Length = 287

 Score = 21.8 bits (44), Expect = 3.8
 Identities = 10/28 (35%), Positives = 14/28 (50%)
 Frame = +3

Query: 195 MLNNTRIHLLPSMNPDGYETARPGDFDG 278
           M++N    L+PS    G E + PG   G
Sbjct: 77  MVHNDGTQLMPSPTVSGSEMSSPGAGSG 104


>AJ005421-1|CAA06527.1|  249|Tribolium castaneum caudal protein
           protein.
          Length = 249

 Score = 21.8 bits (44), Expect = 3.8
 Identities = 10/28 (35%), Positives = 14/28 (50%)
 Frame = +3

Query: 195 MLNNTRIHLLPSMNPDGYETARPGDFDG 278
           M++N    L+PS    G E + PG   G
Sbjct: 77  MVHNDGTQLMPSPTVSGSEMSSPGAGSG 104


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like protein
            protein.
          Length = 1156

 Score = 21.8 bits (44), Expect = 3.8
 Identities = 12/39 (30%), Positives = 18/39 (46%)
 Frame = +2

Query: 398  AVNPVRAVCQPAQWRAGRQLPLRRQP*HAQREGVLSSDN 514
            +V+P+ +  QPA+  AG        P  + R G   S N
Sbjct: 912  SVSPLTSPRQPAETHAGSPCRNSASPASSDRSGTPRSTN 950


>DQ855490-1|ABH88177.1|  133|Tribolium castaneum chemosensory
           protein 4 protein.
          Length = 133

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = +3

Query: 282 KGRTNAHDVDLNRNFPD 332
           KGR +   ++L +N PD
Sbjct: 55  KGRCSPDGLELKKNMPD 71


>DQ659249-1|ABG47447.1|  383|Tribolium castaneum chitinase 9
           protein.
          Length = 383

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = -3

Query: 218 VDPRVVQHVLYAVI 177
           VDP +  H+LYA +
Sbjct: 45  VDPTLCTHLLYAFV 58


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 122,158
Number of Sequences: 336
Number of extensions: 2584
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12573240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)