Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--2323
         (523 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY545988-1|AAS99341.1|  423|Anopheles gambiae carboxypeptidase B...    42   2e-05
AJ627286-1|CAF28572.1|  423|Anopheles gambiae carboxypeptidase B...    42   2e-05
AF000953-1|AAB96576.1|  433|Anopheles gambiae carboxypeptidase A...    25   1.5  
AJ438610-3|CAD27475.1|  190|Anopheles gambiae putative RHO small...    24   3.6  
AY345586-1|AAR09143.1|  427|Anopheles gambiae myosuppressin rece...    23   8.2  

>AY545988-1|AAS99341.1|  423|Anopheles gambiae carboxypeptidase B
           precursor protein.
          Length = 423

 Score = 41.5 bits (93), Expect = 2e-05
 Identities = 24/70 (34%), Positives = 35/70 (50%), Gaps = 4/70 (5%)
 Frame = +3

Query: 150 YLCQQYVAGDNRIQNMLNNTRIHLLPSMNPDGY----ETARPGDFDGLKGRTNAHDVDLN 317
           Y+  ++V   ++    L+NT   ++P  NPDGY    E  R    +   G    + VDLN
Sbjct: 199 YMIHEFVEHSDQYAEQLSNTDYVIVPVANPDGYVYTHEQNRLWRKNRSPGNVLCYGVDLN 258

Query: 318 RNFPDQFGST 347
           RNFP Q+  T
Sbjct: 259 RNFPFQWDRT 268


>AJ627286-1|CAF28572.1|  423|Anopheles gambiae carboxypeptidase B
           protein.
          Length = 423

 Score = 41.5 bits (93), Expect = 2e-05
 Identities = 24/70 (34%), Positives = 35/70 (50%), Gaps = 4/70 (5%)
 Frame = +3

Query: 150 YLCQQYVAGDNRIQNMLNNTRIHLLPSMNPDGY----ETARPGDFDGLKGRTNAHDVDLN 317
           Y+  ++V   ++    L+NT   ++P  NPDGY    E  R    +   G    + VDLN
Sbjct: 199 YMIHEFVEHSDQYAEQLSNTDYVIVPVANPDGYVYTHEQNRLWRKNRSPGNVLCYGVDLN 258

Query: 318 RNFPDQFGST 347
           RNFP Q+  T
Sbjct: 259 RNFPFQWDRT 268


>AF000953-1|AAB96576.1|  433|Anopheles gambiae carboxypeptidase A
           protein.
          Length = 433

 Score = 25.0 bits (52), Expect = 1.5
 Identities = 14/62 (22%), Positives = 26/62 (41%), Gaps = 1/62 (1%)
 Frame = +3

Query: 66  PGKPEFKYVANMHGNEAVGREXXXXXAKYLCQQYVAG-DNRIQNMLNNTRIHLLPSMNPD 242
           PG+P       +H  E +          Y+  Q +   D +++ +      ++ P+ NPD
Sbjct: 175 PGRPGVFLEGGIHAREWIS----PATVTYILNQLLTSEDAKVRALAEKFDWYVFPNANPD 230

Query: 243 GY 248
           GY
Sbjct: 231 GY 232


>AJ438610-3|CAD27475.1|  190|Anopheles gambiae putative RHO small
           GTPase protein.
          Length = 190

 Score = 23.8 bits (49), Expect = 3.6
 Identities = 9/24 (37%), Positives = 12/24 (50%)
 Frame = -1

Query: 118 TASFPCILATYLNSGFPGMWTPGS 47
           T    C+L +Y    FPG + P S
Sbjct: 16  TVGKTCMLISYTTDSFPGEYVPTS 39


>AY345586-1|AAR09143.1|  427|Anopheles gambiae myosuppressin
           receptor protein.
          Length = 427

 Score = 22.6 bits (46), Expect = 8.2
 Identities = 8/16 (50%), Positives = 13/16 (81%)
 Frame = -3

Query: 350 LGTSKLIREIPVQVNI 303
           LGTS+L+R+ P  +N+
Sbjct: 232 LGTSQLVRDNPALLNV 247


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 562,141
Number of Sequences: 2352
Number of extensions: 11467
Number of successful extensions: 37
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 35
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 47783067
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)