Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--2315
         (635 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor pro...    29   0.038
DQ666693-1|ABG29167.1|  250|Apis mellifera MAX dimerization prot...    25   0.61 
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    23   2.5  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    23   2.5  
AY352277-2|AAQ67419.1|   88|Apis mellifera EX4.8-5.8 protein.          23   3.3  
DQ026037-1|AAY87896.1|  431|Apis mellifera nicotinic acetylcholi...    21   7.6  

>DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor
           protein.
          Length = 405

 Score = 29.1 bits (62), Expect = 0.038
 Identities = 12/22 (54%), Positives = 16/22 (72%)
 Frame = +1

Query: 103 ARSLRLRRTQCCASLVTCLRAS 168
           A+S+R RRT+C  + VTC R S
Sbjct: 251 AKSIRARRTECVTNSVTCDRPS 272


>DQ666693-1|ABG29167.1|  250|Apis mellifera MAX dimerization protein
           protein.
          Length = 250

 Score = 25.0 bits (52), Expect = 0.61
 Identities = 9/27 (33%), Positives = 15/27 (55%)
 Frame = +1

Query: 43  EKPRKSRNQGIKTIHNHYHSARSLRLR 123
           ++P+  ++QG +T HN     R   LR
Sbjct: 39  KRPKTKKSQGSRTTHNELEKNRRAHLR 65


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 10/30 (33%), Positives = 18/30 (60%)
 Frame = +3

Query: 507 LYPFLRKLRERRSMKFSPLIENIEEGVQND 596
           LY  L K+   +  + + LI+NI + ++ND
Sbjct: 340 LYANLMKIVHEKQQEITGLIQNIIQEMKND 369


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 10/30 (33%), Positives = 18/30 (60%)
 Frame = +3

Query: 507 LYPFLRKLRERRSMKFSPLIENIEEGVQND 596
           LY  L K+   +  + + LI+NI + ++ND
Sbjct: 378 LYANLMKIVHEKQQEITGLIQNIIQEMKND 407


>AY352277-2|AAQ67419.1|   88|Apis mellifera EX4.8-5.8 protein.
          Length = 88

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = -1

Query: 131 CVLLSRKLRAEW*WLCIVFIP 69
           C+++ RKL   W  + I F+P
Sbjct: 57  CIVVRRKLEENWIHVDISFLP 77


>DQ026037-1|AAY87896.1|  431|Apis mellifera nicotinic acetylcholine
           receptor alpha9subunit protein.
          Length = 431

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 9/18 (50%), Positives = 10/18 (55%)
 Frame = -2

Query: 319 NDNAYAF*YLLFRKRIQH 266
           NDN + F YLL  K   H
Sbjct: 23  NDNEFGFSYLLNCKNYDH 40


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 177,539
Number of Sequences: 438
Number of extensions: 3971
Number of successful extensions: 8
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19071468
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)