Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--2314
(595 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF016442-8|AAB65916.1| 881|Caenorhabditis elegans Hypothetical ... 56 1e-08
Z81128-7|CAB03400.1| 898|Caenorhabditis elegans Hypothetical pr... 56 2e-08
Z68750-6|CAA92970.1| 1035|Caenorhabditis elegans Hypothetical pr... 53 2e-07
Z68750-5|CAA92969.1| 1032|Caenorhabditis elegans Hypothetical pr... 53 2e-07
Z68300-4|CAA92619.1| 1035|Caenorhabditis elegans Hypothetical pr... 53 2e-07
Z68300-3|CAA92618.1| 1032|Caenorhabditis elegans Hypothetical pr... 53 2e-07
Z30215-9|CAB54247.1| 1037|Caenorhabditis elegans Hypothetical pr... 52 3e-07
Z30215-8|CAA82941.1| 1040|Caenorhabditis elegans Hypothetical pr... 52 3e-07
Z29121-4|CAB54514.1| 1037|Caenorhabditis elegans Hypothetical pr... 52 3e-07
Z29121-3|CAA82389.1| 1040|Caenorhabditis elegans Hypothetical pr... 52 3e-07
AF016682-2|AAO38604.1| 891|Caenorhabditis elegans Argonaute (pl... 50 2e-06
AF016682-1|AAB66187.2| 910|Caenorhabditis elegans Argonaute (pl... 50 2e-06
Z69663-5|CAA93512.2| 1002|Caenorhabditis elegans Hypothetical pr... 49 2e-06
Z69661-8|CAA93496.2| 1002|Caenorhabditis elegans Hypothetical pr... 49 2e-06
DQ178241-1|ABA18180.1| 1010|Caenorhabditis elegans argonaute-lik... 49 2e-06
AF067217-5|AAO38635.1| 856|Caenorhabditis elegans Hypothetical ... 48 5e-06
AF067217-4|AAF99978.1| 887|Caenorhabditis elegans Hypothetical ... 48 5e-06
AF000265-2|AAO38667.1| 887|Caenorhabditis elegans Paz/piwi doma... 48 5e-06
AF000265-1|AAB52946.2| 913|Caenorhabditis elegans Paz/piwi doma... 48 5e-06
AC024800-5|AAF60724.1| 966|Caenorhabditis elegans Hypothetical ... 37 0.009
Z83113-4|CAB05546.2| 1020|Caenorhabditis elegans Hypothetical pr... 35 0.050
AF180730-1|AAF06159.1| 1020|Caenorhabditis elegans RNA interfere... 35 0.050
Z81461-1|CAB03833.1| 944|Caenorhabditis elegans Hypothetical pr... 31 0.47
U50068-5|AAB37734.1| 722|Caenorhabditis elegans Temporarily ass... 29 2.5
AF040648-2|AAL06033.1| 101|Caenorhabditis elegans Hypothetical ... 29 3.3
AF040648-1|AAK21412.1| 519|Caenorhabditis elegans Hypothetical ... 29 3.3
AF036702-7|AAB88372.1| 360|Caenorhabditis elegans Hypothetical ... 28 4.4
U80437-10|AAN84839.1| 656|Caenorhabditis elegans Hypothetical p... 27 7.6
>AF016442-8|AAB65916.1| 881|Caenorhabditis elegans Hypothetical
protein K12B6.1 protein.
Length = 881
Score = 56.4 bits (130), Expect = 1e-08
Identities = 42/156 (26%), Positives = 71/156 (45%), Gaps = 1/156 (0%)
Frame = +3
Query: 30 PKKGVWQANCLLKPEALNSWGFIAIELDPRGCNYEDIVSKLMNTGRQMGMNVTQPKMACF 209
P A +KP L +W + G D + L +T RQ+GM V+ P ++
Sbjct: 475 PATDFMPAGTFIKPTKLTNWEVVF----DNGVQLVDCIQHLTSTMRQLGMEVSNPTVSL- 529
Query: 210 NIRINDLHKSMLHALEKQVNFLVVVVSGRGRDYYHKLKQIAELKVGILTQCIKEDTATRR 389
IN + + K N +++ + + YH + E + +LTQ I+ +TA +
Sbjct: 530 ---INRGYLRSIFENAKAANRQLIMFITKSMNNYHTEIKCLEQEFDLLTQDIRFETAVKL 586
Query: 390 MNPQ-TARNILLKVNSKLMGINQALENRPFLSA*RV 494
Q T +NI+ K N KL G+N L + F ++ R+
Sbjct: 587 AQQQNTRKNIIYKTNMKLGGLNYELRSGVFSNSKRL 622
>Z81128-7|CAB03400.1| 898|Caenorhabditis elegans Hypothetical
protein T23D8.7 protein.
Length = 898
Score = 56.0 bits (129), Expect = 2e-08
Identities = 41/155 (26%), Positives = 68/155 (43%), Gaps = 5/155 (3%)
Frame = +3
Query: 24 TVPKKGVW--QANCLLKPEALNSWGFIAIELDP--RGCNYEDIVSKLMNTGRQMGMNVTQ 191
TVP G W + + W + + V L+N ++GM +
Sbjct: 487 TVPNNGTWDMRGKNFYSGIQIREWAIVCFASPEIIGEASMRSFVRNLVNVASEIGMPFLE 546
Query: 192 PKMACFNIRINDLHKSMLHALEKQVNFLVVVVSGRGRDY-YHKLKQIAELKVGILTQCIK 368
C + K + H L +Q N +V+ G+ Y +LK+ EL +G+ TQC++
Sbjct: 547 EHRFCRYAEPDQTVKLLEH-LNEQYNLQLVLCIVPGKSVVYGELKRKGEL-LGLTTQCVR 604
Query: 369 EDTATRRMNPQTARNILLKVNSKLMGINQALENRP 473
++ +P T N+ +K+NSKL GIN L + P
Sbjct: 605 SQNVSKA-SPHTLSNLCMKINSKLGGINVILSSPP 638
>Z68750-6|CAA92970.1| 1035|Caenorhabditis elegans Hypothetical protein
T22B3.2b protein.
Length = 1035
Score = 52.8 bits (121), Expect = 2e-07
Identities = 40/154 (25%), Positives = 70/154 (45%), Gaps = 10/154 (6%)
Frame = +3
Query: 30 PKKGVWQAN--CLLKPEALNSWGFIAIELDPRG-CNYEDIVSKLMNTGRQMGMNVTQ-PK 197
PK G W + L P S+ IA+ +DPR + + L MGMN + P
Sbjct: 566 PKDGSWSMDHQTLYMPATCRSYSMIAL-VDPRDQTSLQTFCQSLTMKATAMGMNFPRWPD 624
Query: 198 MACFNIRINDLHKSMLHALEKQ------VNFLVVVVSGRGRDYYHKLKQIAELKVGILTQ 359
+ + D+ ++ + ++VV+ + D Y +K+ +++ GI++Q
Sbjct: 625 LVKYGRSKEDVCTLFTEIADEYRVTNTVCDCIIVVLQSKNSDIYMTVKEQSDIVHGIMSQ 684
Query: 360 CIKEDTATRRMNPQTARNILLKVNSKLMGINQAL 461
C+ + R P T NI+LK+N K+ GIN +
Sbjct: 685 CVLMKNVS-RPTPATCANIILKLNMKMGGINSRI 717
>Z68750-5|CAA92969.1| 1032|Caenorhabditis elegans Hypothetical protein
T22B3.2a protein.
Length = 1032
Score = 52.8 bits (121), Expect = 2e-07
Identities = 40/154 (25%), Positives = 70/154 (45%), Gaps = 10/154 (6%)
Frame = +3
Query: 30 PKKGVWQAN--CLLKPEALNSWGFIAIELDPRG-CNYEDIVSKLMNTGRQMGMNVTQ-PK 197
PK G W + L P S+ IA+ +DPR + + L MGMN + P
Sbjct: 563 PKDGSWSMDHQTLYMPATCRSYSMIAL-VDPRDQTSLQTFCQSLTMKATAMGMNFPRWPD 621
Query: 198 MACFNIRINDLHKSMLHALEKQ------VNFLVVVVSGRGRDYYHKLKQIAELKVGILTQ 359
+ + D+ ++ + ++VV+ + D Y +K+ +++ GI++Q
Sbjct: 622 LVKYGRSKEDVCTLFTEIADEYRVTNTVCDCIIVVLQSKNSDIYMTVKEQSDIVHGIMSQ 681
Query: 360 CIKEDTATRRMNPQTARNILLKVNSKLMGINQAL 461
C+ + R P T NI+LK+N K+ GIN +
Sbjct: 682 CVLMKNVS-RPTPATCANIILKLNMKMGGINSRI 714
>Z68300-4|CAA92619.1| 1035|Caenorhabditis elegans Hypothetical protein
T22B3.2b protein.
Length = 1035
Score = 52.8 bits (121), Expect = 2e-07
Identities = 40/154 (25%), Positives = 70/154 (45%), Gaps = 10/154 (6%)
Frame = +3
Query: 30 PKKGVWQAN--CLLKPEALNSWGFIAIELDPRG-CNYEDIVSKLMNTGRQMGMNVTQ-PK 197
PK G W + L P S+ IA+ +DPR + + L MGMN + P
Sbjct: 566 PKDGSWSMDHQTLYMPATCRSYSMIAL-VDPRDQTSLQTFCQSLTMKATAMGMNFPRWPD 624
Query: 198 MACFNIRINDLHKSMLHALEKQ------VNFLVVVVSGRGRDYYHKLKQIAELKVGILTQ 359
+ + D+ ++ + ++VV+ + D Y +K+ +++ GI++Q
Sbjct: 625 LVKYGRSKEDVCTLFTEIADEYRVTNTVCDCIIVVLQSKNSDIYMTVKEQSDIVHGIMSQ 684
Query: 360 CIKEDTATRRMNPQTARNILLKVNSKLMGINQAL 461
C+ + R P T NI+LK+N K+ GIN +
Sbjct: 685 CVLMKNVS-RPTPATCANIILKLNMKMGGINSRI 717
>Z68300-3|CAA92618.1| 1032|Caenorhabditis elegans Hypothetical protein
T22B3.2a protein.
Length = 1032
Score = 52.8 bits (121), Expect = 2e-07
Identities = 40/154 (25%), Positives = 70/154 (45%), Gaps = 10/154 (6%)
Frame = +3
Query: 30 PKKGVWQAN--CLLKPEALNSWGFIAIELDPRG-CNYEDIVSKLMNTGRQMGMNVTQ-PK 197
PK G W + L P S+ IA+ +DPR + + L MGMN + P
Sbjct: 563 PKDGSWSMDHQTLYMPATCRSYSMIAL-VDPRDQTSLQTFCQSLTMKATAMGMNFPRWPD 621
Query: 198 MACFNIRINDLHKSMLHALEKQ------VNFLVVVVSGRGRDYYHKLKQIAELKVGILTQ 359
+ + D+ ++ + ++VV+ + D Y +K+ +++ GI++Q
Sbjct: 622 LVKYGRSKEDVCTLFTEIADEYRVTNTVCDCIIVVLQSKNSDIYMTVKEQSDIVHGIMSQ 681
Query: 360 CIKEDTATRRMNPQTARNILLKVNSKLMGINQAL 461
C+ + R P T NI+LK+N K+ GIN +
Sbjct: 682 CVLMKNVS-RPTPATCANIILKLNMKMGGINSRI 714
>Z30215-9|CAB54247.1| 1037|Caenorhabditis elegans Hypothetical protein
ZK757.3b protein.
Length = 1037
Score = 52.0 bits (119), Expect = 3e-07
Identities = 40/154 (25%), Positives = 70/154 (45%), Gaps = 10/154 (6%)
Frame = +3
Query: 30 PKKGVWQAN--CLLKPEALNSWGFIAIELDPRG-CNYEDIVSKLMNTGRQMGMNVTQ-PK 197
PK G W + L P S+ IA+ +DPR + + L MGMN + P
Sbjct: 568 PKDGSWTMDNQTLYMPATCRSYSMIAL-VDPRDQTSLQTFCQSLTMKATAMGMNFPRWPD 626
Query: 198 MACFNIRINDLHKSMLHALEKQ------VNFLVVVVSGRGRDYYHKLKQIAELKVGILTQ 359
+ + D+ ++ + ++VV+ + D Y +K+ +++ GI++Q
Sbjct: 627 LVKYGRSKEDVCTLFTEIADEYRVTNTVCDCIIVVLQSKNSDIYMTVKEQSDIVHGIMSQ 686
Query: 360 CIKEDTATRRMNPQTARNILLKVNSKLMGINQAL 461
C+ + R P T NI+LK+N K+ GIN +
Sbjct: 687 CVLMKNVS-RPTPATCANIVLKLNMKMGGINSRI 719
>Z30215-8|CAA82941.1| 1040|Caenorhabditis elegans Hypothetical protein
ZK757.3a protein.
Length = 1040
Score = 52.0 bits (119), Expect = 3e-07
Identities = 40/154 (25%), Positives = 70/154 (45%), Gaps = 10/154 (6%)
Frame = +3
Query: 30 PKKGVWQAN--CLLKPEALNSWGFIAIELDPRG-CNYEDIVSKLMNTGRQMGMNVTQ-PK 197
PK G W + L P S+ IA+ +DPR + + L MGMN + P
Sbjct: 571 PKDGSWTMDNQTLYMPATCRSYSMIAL-VDPRDQTSLQTFCQSLTMKATAMGMNFPRWPD 629
Query: 198 MACFNIRINDLHKSMLHALEKQ------VNFLVVVVSGRGRDYYHKLKQIAELKVGILTQ 359
+ + D+ ++ + ++VV+ + D Y +K+ +++ GI++Q
Sbjct: 630 LVKYGRSKEDVCTLFTEIADEYRVTNTVCDCIIVVLQSKNSDIYMTVKEQSDIVHGIMSQ 689
Query: 360 CIKEDTATRRMNPQTARNILLKVNSKLMGINQAL 461
C+ + R P T NI+LK+N K+ GIN +
Sbjct: 690 CVLMKNVS-RPTPATCANIVLKLNMKMGGINSRI 722
>Z29121-4|CAB54514.1| 1037|Caenorhabditis elegans Hypothetical protein
ZK757.3b protein.
Length = 1037
Score = 52.0 bits (119), Expect = 3e-07
Identities = 40/154 (25%), Positives = 70/154 (45%), Gaps = 10/154 (6%)
Frame = +3
Query: 30 PKKGVWQAN--CLLKPEALNSWGFIAIELDPRG-CNYEDIVSKLMNTGRQMGMNVTQ-PK 197
PK G W + L P S+ IA+ +DPR + + L MGMN + P
Sbjct: 568 PKDGSWTMDNQTLYMPATCRSYSMIAL-VDPRDQTSLQTFCQSLTMKATAMGMNFPRWPD 626
Query: 198 MACFNIRINDLHKSMLHALEKQ------VNFLVVVVSGRGRDYYHKLKQIAELKVGILTQ 359
+ + D+ ++ + ++VV+ + D Y +K+ +++ GI++Q
Sbjct: 627 LVKYGRSKEDVCTLFTEIADEYRVTNTVCDCIIVVLQSKNSDIYMTVKEQSDIVHGIMSQ 686
Query: 360 CIKEDTATRRMNPQTARNILLKVNSKLMGINQAL 461
C+ + R P T NI+LK+N K+ GIN +
Sbjct: 687 CVLMKNVS-RPTPATCANIVLKLNMKMGGINSRI 719
>Z29121-3|CAA82389.1| 1040|Caenorhabditis elegans Hypothetical protein
ZK757.3a protein.
Length = 1040
Score = 52.0 bits (119), Expect = 3e-07
Identities = 40/154 (25%), Positives = 70/154 (45%), Gaps = 10/154 (6%)
Frame = +3
Query: 30 PKKGVWQAN--CLLKPEALNSWGFIAIELDPRG-CNYEDIVSKLMNTGRQMGMNVTQ-PK 197
PK G W + L P S+ IA+ +DPR + + L MGMN + P
Sbjct: 571 PKDGSWTMDNQTLYMPATCRSYSMIAL-VDPRDQTSLQTFCQSLTMKATAMGMNFPRWPD 629
Query: 198 MACFNIRINDLHKSMLHALEKQ------VNFLVVVVSGRGRDYYHKLKQIAELKVGILTQ 359
+ + D+ ++ + ++VV+ + D Y +K+ +++ GI++Q
Sbjct: 630 LVKYGRSKEDVCTLFTEIADEYRVTNTVCDCIIVVLQSKNSDIYMTVKEQSDIVHGIMSQ 689
Query: 360 CIKEDTATRRMNPQTARNILLKVNSKLMGINQAL 461
C+ + R P T NI+LK+N K+ GIN +
Sbjct: 690 CVLMKNVS-RPTPATCANIVLKLNMKMGGINSRI 722
>AF016682-2|AAO38604.1| 891|Caenorhabditis elegans Argonaute
(plant)-like gene protein2, isoform b protein.
Length = 891
Score = 49.6 bits (113), Expect = 2e-06
Identities = 25/66 (37%), Positives = 40/66 (60%)
Frame = +3
Query: 264 VNFLVVVVSGRGRDYYHKLKQIAELKVGILTQCIKEDTATRRMNPQTARNILLKVNSKLM 443
+ +VVV+ G+ Y ++K++ + +GI TQC++ A R PQT N+ LK+N KL
Sbjct: 545 IQLIVVVLPGK-TPIYAEVKRVGDTVLGIATQCVQAKNAIRT-TPQTLSNLCLKMNVKLG 602
Query: 444 GINQAL 461
G+N L
Sbjct: 603 GVNSIL 608
>AF016682-1|AAB66187.2| 910|Caenorhabditis elegans Argonaute
(plant)-like gene protein2, isoform a protein.
Length = 910
Score = 49.6 bits (113), Expect = 2e-06
Identities = 25/66 (37%), Positives = 40/66 (60%)
Frame = +3
Query: 264 VNFLVVVVSGRGRDYYHKLKQIAELKVGILTQCIKEDTATRRMNPQTARNILLKVNSKLM 443
+ +VVV+ G+ Y ++K++ + +GI TQC++ A R PQT N+ LK+N KL
Sbjct: 564 IQLIVVVLPGK-TPIYAEVKRVGDTVLGIATQCVQAKNAIRT-TPQTLSNLCLKMNVKLG 621
Query: 444 GINQAL 461
G+N L
Sbjct: 622 GVNSIL 627
>Z69663-5|CAA93512.2| 1002|Caenorhabditis elegans Hypothetical
protein F48F7.1 protein.
Length = 1002
Score = 49.2 bits (112), Expect = 2e-06
Identities = 25/66 (37%), Positives = 40/66 (60%)
Frame = +3
Query: 264 VNFLVVVVSGRGRDYYHKLKQIAELKVGILTQCIKEDTATRRMNPQTARNILLKVNSKLM 443
+ +VVV+ G+ Y ++K++ + +GI TQC++ A R PQT N+ LK+N KL
Sbjct: 658 IQLVVVVLPGK-TPVYAEVKRVGDTVLGIATQCVQAKNAIRT-TPQTLSNLCLKMNVKLG 715
Query: 444 GINQAL 461
G+N L
Sbjct: 716 GVNSIL 721
>Z69661-8|CAA93496.2| 1002|Caenorhabditis elegans Hypothetical
protein F48F7.1 protein.
Length = 1002
Score = 49.2 bits (112), Expect = 2e-06
Identities = 25/66 (37%), Positives = 40/66 (60%)
Frame = +3
Query: 264 VNFLVVVVSGRGRDYYHKLKQIAELKVGILTQCIKEDTATRRMNPQTARNILLKVNSKLM 443
+ +VVV+ G+ Y ++K++ + +GI TQC++ A R PQT N+ LK+N KL
Sbjct: 658 IQLVVVVLPGK-TPVYAEVKRVGDTVLGIATQCVQAKNAIRT-TPQTLSNLCLKMNVKLG 715
Query: 444 GINQAL 461
G+N L
Sbjct: 716 GVNSIL 721
>DQ178241-1|ABA18180.1| 1010|Caenorhabditis elegans argonaute-like
protein.
Length = 1010
Score = 49.2 bits (112), Expect = 2e-06
Identities = 25/66 (37%), Positives = 40/66 (60%)
Frame = +3
Query: 264 VNFLVVVVSGRGRDYYHKLKQIAELKVGILTQCIKEDTATRRMNPQTARNILLKVNSKLM 443
+ +VVV+ G+ Y ++K++ + +GI TQC++ A R PQT N+ LK+N KL
Sbjct: 666 IQLVVVVLPGK-TPVYAEVKRVGDTVLGIATQCVQAKNAIRT-TPQTLSNLCLKMNVKLG 723
Query: 444 GINQAL 461
G+N L
Sbjct: 724 GVNSIL 729
>AF067217-5|AAO38635.1| 856|Caenorhabditis elegans Hypothetical
protein F56A6.1b protein.
Length = 856
Score = 48.0 bits (109), Expect = 5e-06
Identities = 37/102 (36%), Positives = 52/102 (50%), Gaps = 1/102 (0%)
Frame = +3
Query: 174 GMNVTQPKMACFNIRINDLHKSMLHALEKQVNFLVVVVSGRGRDYYHKLKQIAELKVGIL 353
GM + P M+ F IR DL A L VV R +Y+ ++K + E K +L
Sbjct: 519 GMKCSNPTMS-FIIR-GDLEPIFKKAKAAGTQLLFFVVKSR-YNYHQQIKAL-EQKYDVL 574
Query: 354 TQCIKEDTATRRMN-PQTARNILLKVNSKLMGINQALENRPF 476
TQ I+ +TA + PQT NI+ K N KL G+N A+ + F
Sbjct: 575 TQEIRAETAEKVFRQPQTRLNIINKTNMKLGGLNYAIGSEAF 616
>AF067217-4|AAF99978.1| 887|Caenorhabditis elegans Hypothetical
protein F56A6.1a protein.
Length = 887
Score = 48.0 bits (109), Expect = 5e-06
Identities = 37/102 (36%), Positives = 52/102 (50%), Gaps = 1/102 (0%)
Frame = +3
Query: 174 GMNVTQPKMACFNIRINDLHKSMLHALEKQVNFLVVVVSGRGRDYYHKLKQIAELKVGIL 353
GM + P M+ F IR DL A L VV R +Y+ ++K + E K +L
Sbjct: 519 GMKCSNPTMS-FIIR-GDLEPIFKKAKAAGTQLLFFVVKSR-YNYHQQIKAL-EQKYDVL 574
Query: 354 TQCIKEDTATRRMN-PQTARNILLKVNSKLMGINQALENRPF 476
TQ I+ +TA + PQT NI+ K N KL G+N A+ + F
Sbjct: 575 TQEIRAETAEKVFRQPQTRLNIINKTNMKLGGLNYAIGSEAF 616
>AF000265-2|AAO38667.1| 887|Caenorhabditis elegans Paz/piwi
domain-containing protein1, isoform c protein.
Length = 887
Score = 48.0 bits (109), Expect = 5e-06
Identities = 37/102 (36%), Positives = 52/102 (50%), Gaps = 1/102 (0%)
Frame = +3
Query: 174 GMNVTQPKMACFNIRINDLHKSMLHALEKQVNFLVVVVSGRGRDYYHKLKQIAELKVGIL 353
GM + P M+ F IR DL A L VV R +Y+ ++K + E K +L
Sbjct: 519 GMKCSNPTMS-FIIR-GDLEPIFKKAKAAGTQLLFFVVKSR-YNYHQQIKAL-EQKYDVL 574
Query: 354 TQCIKEDTATRRMN-PQTARNILLKVNSKLMGINQALENRPF 476
TQ I+ +TA + PQT NI+ K N KL G+N A+ + F
Sbjct: 575 TQEIRAETAEKVFRQPQTRLNIINKTNMKLGGLNYAIGSEAF 616
>AF000265-1|AAB52946.2| 913|Caenorhabditis elegans Paz/piwi
domain-containing protein1, isoform a protein.
Length = 913
Score = 48.0 bits (109), Expect = 5e-06
Identities = 37/102 (36%), Positives = 52/102 (50%), Gaps = 1/102 (0%)
Frame = +3
Query: 174 GMNVTQPKMACFNIRINDLHKSMLHALEKQVNFLVVVVSGRGRDYYHKLKQIAELKVGIL 353
GM + P M+ F IR DL A L VV R +Y+ ++K + E K +L
Sbjct: 545 GMKCSNPTMS-FIIR-GDLEPIFKKAKAAGTQLLFFVVKSR-YNYHQQIKAL-EQKYDVL 600
Query: 354 TQCIKEDTATRRMN-PQTARNILLKVNSKLMGINQALENRPF 476
TQ I+ +TA + PQT NI+ K N KL G+N A+ + F
Sbjct: 601 TQEIRAETAEKVFRQPQTRLNIINKTNMKLGGLNYAIGSEAF 642
>AC024800-5|AAF60724.1| 966|Caenorhabditis elegans Hypothetical
protein Y49F6A.1 protein.
Length = 966
Score = 37.1 bits (82), Expect = 0.009
Identities = 31/120 (25%), Positives = 54/120 (45%), Gaps = 7/120 (5%)
Frame = +3
Query: 126 NYEDIVSKLMNTGRQMGMNVTQP-----KMACFNIRINDLHKSMLHALEKQVNFLVVVVS 290
N D KL + R+ G+ + + K+ FN K + L++ +++ ++
Sbjct: 532 NLSDFCMKLCDLCRRSGLEIRRETRDWIKIENFNPTSTIELKEQMKRLQQSNCSIIIGIT 591
Query: 291 GRGRDYYHKLKQIAELKVGILTQCIKEDTATRRM--NPQTARNILLKVNSKLMGINQALE 464
+ H + + E VG+ T I TA + N QTA N++ K+N K GIN +E
Sbjct: 592 EEKKPEVHDVLKYFEAAVGLQTMQIHSKTAGFIISGNGQTAGNVIKKLNLKCGGINYIVE 651
>Z83113-4|CAB05546.2| 1020|Caenorhabditis elegans Hypothetical
protein K08H10.7 protein.
Length = 1020
Score = 34.7 bits (76), Expect = 0.050
Identities = 24/87 (27%), Positives = 44/87 (50%), Gaps = 10/87 (11%)
Frame = +3
Query: 234 KSMLHAL--EKQVNFLVVVVSGRGRDYYHKLKQIAELKVGILTQCIKEDTATRRM----- 392
K+M L ++Q + +++S R + Y +K + +G+ Q I +T T+ +
Sbjct: 605 KNMFERLPDKEQKVLMFIIISKRQLNAYGFVKHYCDHTIGVANQHITSETVTKALASLRH 664
Query: 393 ---NPQTARNILLKVNSKLMGINQALE 464
+ + I LK+N+KL GINQ L+
Sbjct: 665 EKGSKRIFYQIALKINAKLGGINQELD 691
>AF180730-1|AAF06159.1| 1020|Caenorhabditis elegans RNA interference
promoting factorRDE-1 protein.
Length = 1020
Score = 34.7 bits (76), Expect = 0.050
Identities = 24/87 (27%), Positives = 44/87 (50%), Gaps = 10/87 (11%)
Frame = +3
Query: 234 KSMLHAL--EKQVNFLVVVVSGRGRDYYHKLKQIAELKVGILTQCIKEDTATRRM----- 392
K+M L ++Q + +++S R + Y +K + +G+ Q I +T T+ +
Sbjct: 605 KNMFERLPDKEQKVLMFIIISKRQLNAYGFVKHYCDHTIGVANQHITSETVTKALASLRH 664
Query: 393 ---NPQTARNILLKVNSKLMGINQALE 464
+ + I LK+N+KL GINQ L+
Sbjct: 665 EKGSKRIFYQIALKINAKLGGINQELD 691
>Z81461-1|CAB03833.1| 944|Caenorhabditis elegans Hypothetical
protein C04F12.1 protein.
Length = 944
Score = 31.5 bits (68), Expect = 0.47
Identities = 27/109 (24%), Positives = 48/109 (44%), Gaps = 3/109 (2%)
Frame = +3
Query: 135 DIVSKLMNTGRQMGMNVTQPKMACFNIR--INDLHKSMLHALEKQVNFLVVVVSGRGRDY 308
++ S L + +GM + Q + N I + M QV +V+
Sbjct: 541 ELQSILSKKAKDVGMTIGQIDVEDLNDPDIIGAIENKMTILKTSQVKPIVIYADHTSEGT 600
Query: 309 YHKLKQIAELKVGILTQCIKEDTATRRMNPQ-TARNILLKVNSKLMGIN 452
+ LK + E ++TQ + D + +R + TA N+L+K+N K G+N
Sbjct: 601 HSTLK-LQERLCEVITQQVALDKSLKRTPGKVTANNLLMKLNLKYGGVN 648
>U50068-5|AAB37734.1| 722|Caenorhabditis elegans Temporarily
assigned gene nameprotein 292 protein.
Length = 722
Score = 29.1 bits (62), Expect = 2.5
Identities = 21/101 (20%), Positives = 47/101 (46%), Gaps = 5/101 (4%)
Frame = +3
Query: 78 LNSWGFIAIELDPRGCNYEDIVSKLMNTGRQMGMNVTQPKMACFN-IRINDLHKSMLHAL 254
+ +W I G + +++ N GR + + + +P N I ND + + A+
Sbjct: 328 MTNWIVIGPGSGNSGLLAQKFIAEARNLGRTLQVQLGEPMCVKINGISPNDYLEGLKAAI 387
Query: 255 E----KQVNFLVVVVSGRGRDYYHKLKQIAELKVGILTQCI 365
+ ++++ LVV+++ + Y LK+ ++ I QC+
Sbjct: 388 KSVDGEEIHMLVVMLADDNKTRYDSLKKYLCVECPIPNQCV 428
>AF040648-2|AAL06033.1| 101|Caenorhabditis elegans Hypothetical
protein H19M22.3b protein.
Length = 101
Score = 28.7 bits (61), Expect = 3.3
Identities = 20/59 (33%), Positives = 23/59 (38%)
Frame = +2
Query: 305 LLSQAETDCRTQSGYTDAVYQRRYRHAPNEPTNSSEHFTKGEFEAYGNKSGIGESSIPQ 481
L + A T TQ T + S HF KG+ E YG GI SS PQ
Sbjct: 20 LFTLAHTAPTTQHSRTTTQLRLEDEDGGGGVDEDSIHFVKGQMEKYGYLKGIDHSS-PQ 77
>AF040648-1|AAK21412.1| 519|Caenorhabditis elegans Hypothetical
protein H19M22.3a protein.
Length = 519
Score = 28.7 bits (61), Expect = 3.3
Identities = 20/59 (33%), Positives = 23/59 (38%)
Frame = +2
Query: 305 LLSQAETDCRTQSGYTDAVYQRRYRHAPNEPTNSSEHFTKGEFEAYGNKSGIGESSIPQ 481
L + A T TQ T + S HF KG+ E YG GI SS PQ
Sbjct: 20 LFTLAHTAPTTQHSRTTTQLRLEDEDGGGGVDEDSIHFVKGQMEKYGYLKGIDHSS-PQ 77
>AF036702-7|AAB88372.1| 360|Caenorhabditis elegans Hypothetical
protein F33D4.4 protein.
Length = 360
Score = 28.3 bits (60), Expect = 4.4
Identities = 20/57 (35%), Positives = 27/57 (47%), Gaps = 2/57 (3%)
Frame = -1
Query: 217 RMLKQAIFGWVTFMPICRPVFISFDTMSS*LHPR-GSNSMAMK-PHEFRASGFRRQL 53
R L IFG++ +P+C P+ ISF H G + + P EF A FR L
Sbjct: 102 RPLANRIFGFIANLPMCIPMSISFKKYHLEHHRNLGEDVIDTDVPTEFEAKVFRTWL 158
>U80437-10|AAN84839.1| 656|Caenorhabditis elegans Hypothetical
protein C43E11.11 protein.
Length = 656
Score = 27.5 bits (58), Expect = 7.6
Identities = 16/76 (21%), Positives = 36/76 (47%)
Frame = -3
Query: 248 VQHTLVQVIYTDVEASHLWLGHVHAHLSTGIH*LRHDVFIITSTWIQFYGNEAP*IQSFR 69
+Q L + + D+ +H+ H+H+ + I D FI+ +T ++ + ++ +
Sbjct: 476 MQELLTYINHIDMHMAHVSRAVCHSHVLSQIAEYVIDSFILNATLVRSHASDERQLIVID 535
Query: 68 FQKTVGLPYSLLWYSK 21
F + + S+ W SK
Sbjct: 536 FSRLLEAVRSMEWPSK 551
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,927,777
Number of Sequences: 27780
Number of extensions: 363853
Number of successful extensions: 859
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 800
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 841
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1258229602
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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