Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--2313
         (618 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.            24   4.5  
AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha ...    23   6.0  
AF080564-1|AAC31944.1|  372|Anopheles gambiae Sex combs reduced ...    23   6.0  
AF543192-1|AAN40409.1|  636|Anopheles gambiae amino acid transpo...    23   7.9  

>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
          Length = 3361

 Score = 23.8 bits (49), Expect = 4.5
 Identities = 15/31 (48%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
 Frame = +1

Query: 211  SSPETLFQLRGP-ATSDFIVTFPYWIVTLYR 300
            SSP T   L G  ATS FIVT P  ++  +R
Sbjct: 2829 SSPGTWNALLGGIATSAFIVTNPNQLINTFR 2859


>AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha 1
           chain precursor protein.
          Length = 801

 Score = 23.4 bits (48), Expect = 6.0
 Identities = 9/23 (39%), Positives = 11/23 (47%)
 Frame = -1

Query: 609 PGQPNQSGQTTGPAGGDENQRMP 541
           PGQP  +G    P GG+     P
Sbjct: 391 PGQPGIAGPAGAPGGGEGRPGAP 413


>AF080564-1|AAC31944.1|  372|Anopheles gambiae Sex combs reduced
           homeotic protein protein.
          Length = 372

 Score = 23.4 bits (48), Expect = 6.0
 Identities = 13/44 (29%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
 Frame = -2

Query: 617 DPGRGSP-INPGKPPGPLVVMKTSGCHRGSPSLPLDTANIVTNT 489
           D   G P I+P   PG +V   +     G+PS  + +++   NT
Sbjct: 166 DGNNGRPEISPKLSPGSVVESVSRSLKSGNPSTAVSSSSTNNNT 209


>AF543192-1|AAN40409.1|  636|Anopheles gambiae amino acid
           transporter Ag_AAT8 protein.
          Length = 636

 Score = 23.0 bits (47), Expect = 7.9
 Identities = 8/12 (66%), Positives = 8/12 (66%)
 Frame = +3

Query: 525 RWTTPVASAGFH 560
           RWTTP A  G H
Sbjct: 22  RWTTPAAPNGVH 33


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 724,581
Number of Sequences: 2352
Number of extensions: 16559
Number of successful extensions: 12
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 60553008
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)