Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--2313
(618 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X54412-1|CAA38276.1| 931|Homo sapiens protein ( Human mRNA for ... 31 2.5
BC113617-1|AAI13618.1| 757|Homo sapiens relaxin/insulin-like fa... 31 2.5
BC112142-1|AAI12143.1| 757|Homo sapiens leucine-rich repeat-con... 31 2.5
BC063646-1|AAH63646.1| 678|Homo sapiens collagen, type IX, alph... 31 2.5
AY899850-1|AAX85198.1| 724|Homo sapiens LGR7.10 protein. 31 2.5
AY899849-1|AAX85197.1| 709|Homo sapiens LGR7.2 protein. 31 2.5
AL160262-4|CAI42321.1| 921|Homo sapiens collagen type IX alpha ... 31 2.5
AL160262-3|CAI42320.1| 448|Homo sapiens collagen type IX alpha ... 31 2.5
AL080275-3|CAI19590.1| 921|Homo sapiens collagen type IX alpha ... 31 2.5
AL080275-2|CAI19589.1| 448|Homo sapiens collagen type IX alpha ... 31 2.5
AF190500-1|AAG17167.1| 757|Homo sapiens leucine-rich repeat-con... 31 2.5
AF036130-2|AAC33528.1| 678|Homo sapiens collagen type IX alpha ... 31 2.5
AF036130-1|AAC33527.1| 921|Homo sapiens collagen type IX alpha ... 31 2.5
AB208943-1|BAD92180.1| 627|Homo sapiens leucine-rich repeat-con... 31 2.5
>X54412-1|CAA38276.1| 931|Homo sapiens protein ( Human mRNA for
alpha1(IX) collagen (long form). ).
Length = 931
Score = 31.5 bits (68), Expect = 2.5
Identities = 16/33 (48%), Positives = 16/33 (48%)
Frame = -2
Query: 617 DPGRGSPINPGKPPGPLVVMKTSGCHRGSPSLP 519
DPGR P P PPGP T G H G P P
Sbjct: 383 DPGRRGPPGPPGPPGP---RGTIGFHDGDPLCP 412
>BC113617-1|AAI13618.1| 757|Homo sapiens relaxin/insulin-like
family peptide receptor 1 protein.
Length = 757
Score = 31.5 bits (68), Expect = 2.5
Identities = 19/67 (28%), Positives = 39/67 (58%)
Frame = -3
Query: 421 HANDQDVSVGG*IQNCSIFKFINTISGILILRSFGPKFNTVYTTSLSNKEMSL*NQKSRD 242
H+ D + S+G I + +IF IN + I+I+ S+G F +V+ ++++ E+ NQ ++
Sbjct: 567 HSEDTE-SIGAQIYSVAIFLGINLAAFIIIVFSYGSMFYSVHQSAITATEIR--NQVKKE 623
Query: 241 LGVGTTF 221
+ + F
Sbjct: 624 MILAKRF 630
>BC112142-1|AAI12143.1| 757|Homo sapiens leucine-rich
repeat-containing G protein-coupled receptor 7 protein.
Length = 757
Score = 31.5 bits (68), Expect = 2.5
Identities = 19/67 (28%), Positives = 39/67 (58%)
Frame = -3
Query: 421 HANDQDVSVGG*IQNCSIFKFINTISGILILRSFGPKFNTVYTTSLSNKEMSL*NQKSRD 242
H+ D + S+G I + +IF IN + I+I+ S+G F +V+ ++++ E+ NQ ++
Sbjct: 567 HSEDTE-SIGAQIYSVAIFLGINLAAFIIIVFSYGSMFYSVHQSAITATEIR--NQVKKE 623
Query: 241 LGVGTTF 221
+ + F
Sbjct: 624 MILAKRF 630
>BC063646-1|AAH63646.1| 678|Homo sapiens collagen, type IX, alpha 1
protein.
Length = 678
Score = 31.5 bits (68), Expect = 2.5
Identities = 16/33 (48%), Positives = 16/33 (48%)
Frame = -2
Query: 617 DPGRGSPINPGKPPGPLVVMKTSGCHRGSPSLP 519
DPGR P P PPGP T G H G P P
Sbjct: 140 DPGRRGPPGPPGPPGP---RGTIGFHDGDPLCP 169
>AY899850-1|AAX85198.1| 724|Homo sapiens LGR7.10 protein.
Length = 724
Score = 31.5 bits (68), Expect = 2.5
Identities = 19/67 (28%), Positives = 39/67 (58%)
Frame = -3
Query: 421 HANDQDVSVGG*IQNCSIFKFINTISGILILRSFGPKFNTVYTTSLSNKEMSL*NQKSRD 242
H+ D + S+G I + +IF IN + I+I+ S+G F +V+ ++++ E+ NQ ++
Sbjct: 534 HSEDTE-SIGAQIYSVAIFLGINLAAFIIIVFSYGSMFYSVHQSAITATEIR--NQVKKE 590
Query: 241 LGVGTTF 221
+ + F
Sbjct: 591 MILAKRF 597
>AY899849-1|AAX85197.1| 709|Homo sapiens LGR7.2 protein.
Length = 709
Score = 31.5 bits (68), Expect = 2.5
Identities = 19/67 (28%), Positives = 39/67 (58%)
Frame = -3
Query: 421 HANDQDVSVGG*IQNCSIFKFINTISGILILRSFGPKFNTVYTTSLSNKEMSL*NQKSRD 242
H+ D + S+G I + +IF IN + I+I+ S+G F +V+ ++++ E+ NQ ++
Sbjct: 519 HSEDTE-SIGAQIYSVAIFLGINLAAFIIIVFSYGSMFYSVHQSAITATEIR--NQVKKE 575
Query: 241 LGVGTTF 221
+ + F
Sbjct: 576 MILAKRF 582
>AL160262-4|CAI42321.1| 921|Homo sapiens collagen type IX alpha 1
protein.
Length = 921
Score = 31.5 bits (68), Expect = 2.5
Identities = 16/33 (48%), Positives = 16/33 (48%)
Frame = -2
Query: 617 DPGRGSPINPGKPPGPLVVMKTSGCHRGSPSLP 519
DPGR P P PPGP T G H G P P
Sbjct: 383 DPGRRGPPGPPGPPGP---RGTIGFHDGDPLCP 412
>AL160262-3|CAI42320.1| 448|Homo sapiens collagen type IX alpha 1
protein.
Length = 448
Score = 31.5 bits (68), Expect = 2.5
Identities = 16/33 (48%), Positives = 16/33 (48%)
Frame = -2
Query: 617 DPGRGSPINPGKPPGPLVVMKTSGCHRGSPSLP 519
DPGR P P PPGP T G H G P P
Sbjct: 140 DPGRRGPPGPPGPPGP---RGTIGFHDGDPLCP 169
>AL080275-3|CAI19590.1| 921|Homo sapiens collagen type IX alpha 1
protein.
Length = 921
Score = 31.5 bits (68), Expect = 2.5
Identities = 16/33 (48%), Positives = 16/33 (48%)
Frame = -2
Query: 617 DPGRGSPINPGKPPGPLVVMKTSGCHRGSPSLP 519
DPGR P P PPGP T G H G P P
Sbjct: 383 DPGRRGPPGPPGPPGP---RGTIGFHDGDPLCP 412
>AL080275-2|CAI19589.1| 448|Homo sapiens collagen type IX alpha 1
protein.
Length = 448
Score = 31.5 bits (68), Expect = 2.5
Identities = 16/33 (48%), Positives = 16/33 (48%)
Frame = -2
Query: 617 DPGRGSPINPGKPPGPLVVMKTSGCHRGSPSLP 519
DPGR P P PPGP T G H G P P
Sbjct: 140 DPGRRGPPGPPGPPGP---RGTIGFHDGDPLCP 169
>AF190500-1|AAG17167.1| 757|Homo sapiens leucine-rich
repeat-containing G protein-coupled receptor 7 protein.
Length = 757
Score = 31.5 bits (68), Expect = 2.5
Identities = 19/67 (28%), Positives = 39/67 (58%)
Frame = -3
Query: 421 HANDQDVSVGG*IQNCSIFKFINTISGILILRSFGPKFNTVYTTSLSNKEMSL*NQKSRD 242
H+ D + S+G I + +IF IN + I+I+ S+G F +V+ ++++ E+ NQ ++
Sbjct: 567 HSEDTE-SIGAQIYSVAIFLGINLAAFIIIVFSYGSMFYSVHQSAITATEIR--NQVKKE 623
Query: 241 LGVGTTF 221
+ + F
Sbjct: 624 MILAKRF 630
>AF036130-2|AAC33528.1| 678|Homo sapiens collagen type IX alpha I
chain, short form protein.
Length = 678
Score = 31.5 bits (68), Expect = 2.5
Identities = 16/33 (48%), Positives = 16/33 (48%)
Frame = -2
Query: 617 DPGRGSPINPGKPPGPLVVMKTSGCHRGSPSLP 519
DPGR P P PPGP T G H G P P
Sbjct: 140 DPGRRGPPGPPGPPGP---RGTIGFHDGDPLCP 169
>AF036130-1|AAC33527.1| 921|Homo sapiens collagen type IX alpha I
chain, long form protein.
Length = 921
Score = 31.5 bits (68), Expect = 2.5
Identities = 16/33 (48%), Positives = 16/33 (48%)
Frame = -2
Query: 617 DPGRGSPINPGKPPGPLVVMKTSGCHRGSPSLP 519
DPGR P P PPGP T G H G P P
Sbjct: 383 DPGRRGPPGPPGPPGP---RGTIGFHDGDPLCP 412
>AB208943-1|BAD92180.1| 627|Homo sapiens leucine-rich
repeat-containing G protein-coupled receptor 7 variant
protein.
Length = 627
Score = 31.5 bits (68), Expect = 2.5
Identities = 19/67 (28%), Positives = 39/67 (58%)
Frame = -3
Query: 421 HANDQDVSVGG*IQNCSIFKFINTISGILILRSFGPKFNTVYTTSLSNKEMSL*NQKSRD 242
H+ D + S+G I + +IF IN + I+I+ S+G F +V+ ++++ E+ NQ ++
Sbjct: 437 HSEDTE-SIGAQIYSVAIFLGINLAAFIIIVFSYGSMFYSVHQSAITATEIR--NQVKKE 493
Query: 241 LGVGTTF 221
+ + F
Sbjct: 494 MILAKRF 500
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 100,053,850
Number of Sequences: 237096
Number of extensions: 2207093
Number of successful extensions: 5668
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 4988
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5647
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6635341780
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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