Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--2308
         (411 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439060-16|CAD27767.1|  278|Anopheles gambiae hypothetical prot...    37   2e-04
DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            24   1.9  
AB090815-2|BAC57906.1|  973|Anopheles gambiae reverse transcript...    23   5.7  
Z22930-3|CAA80515.1|  275|Anopheles gambiae trypsin protein.           22   7.6  

>AJ439060-16|CAD27767.1|  278|Anopheles gambiae hypothetical protein
           protein.
          Length = 278

 Score = 37.1 bits (82), Expect = 2e-04
 Identities = 13/23 (56%), Positives = 19/23 (82%)
 Frame = +2

Query: 335 IPYPVEKKIPYPVKVHVPQPYPL 403
           +P+PV   +P+ VKV++PQPYPL
Sbjct: 178 VPHPVPIAVPHYVKVYIPQPYPL 200



 Score = 29.1 bits (62), Expect = 0.066
 Identities = 13/28 (46%), Positives = 19/28 (67%), Gaps = 6/28 (21%)
 Frame = +2

Query: 338 PYPVEKKIPYPV------KVHVPQPYPL 403
           PYP+E + P+PV      +V VP+PYP+
Sbjct: 231 PYPIEVEKPFPVEVLKKFEVPVPKPYPV 258



 Score = 28.3 bits (60), Expect = 0.12
 Identities = 12/25 (48%), Positives = 17/25 (68%)
 Frame = +2

Query: 335 IPYPVEKKIPYPVKVHVPQPYPLVK 409
           +PY VEK  PYP++V  P P  ++K
Sbjct: 224 VPYTVEK--PYPIEVEKPFPVEVLK 246



 Score = 23.8 bits (49), Expect = 2.5
 Identities = 10/27 (37%), Positives = 16/27 (59%), Gaps = 4/27 (14%)
 Frame = +2

Query: 335 IPYPVEKKIPY----PVKVHVPQPYPL 403
           IP  +EK +PY    P  + V +P+P+
Sbjct: 216 IPKVIEKPVPYTVEKPYPIEVEKPFPV 242



 Score = 22.6 bits (46), Expect = 5.7
 Identities = 7/23 (30%), Positives = 14/23 (60%)
 Frame = +2

Query: 338 PYPVEKKIPYPVKVHVPQPYPLV 406
           PYP++  +  P+K+ + +  P V
Sbjct: 197 PYPLQVNVEQPIKIPIYKVIPKV 219


>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 24.2 bits (50), Expect = 1.9
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = +2

Query: 344 PVEKKIPYPVKVHVPQPYPL 403
           PV   +PYP+ + +P P P+
Sbjct: 625 PVTILVPYPIIIPLPLPIPV 644



 Score = 23.8 bits (49), Expect = 2.5
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = +2

Query: 335 IPYPVEKKIPYPVKVHVP 388
           +PYP+   +P P+ V +P
Sbjct: 630 VPYPIIIPLPLPIPVPIP 647


>AB090815-2|BAC57906.1|  973|Anopheles gambiae reverse transcriptase
           protein.
          Length = 973

 Score = 22.6 bits (46), Expect = 5.7
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = +1

Query: 313 SLPRRKAHPLPGRK 354
           SLPRRK  P P R+
Sbjct: 257 SLPRRKGGPYPRRR 270


>Z22930-3|CAA80515.1|  275|Anopheles gambiae trypsin protein.
          Length = 275

 Score = 22.2 bits (45), Expect = 7.6
 Identities = 6/19 (31%), Positives = 14/19 (73%)
 Frame = +2

Query: 350 EKKIPYPVKVHVPQPYPLV 406
           ++++PYP+   +P+P+  V
Sbjct: 26  QRRVPYPLPRFLPRPHHTV 44


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 269,773
Number of Sequences: 2352
Number of extensions: 3241
Number of successful extensions: 26
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 33349914
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)