Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--2307
         (473 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC096840-1|AAH96840.1|  445|Homo sapiens histamine receptor H3 p...    30   4.7  
AL078633-1|CAC04014.1|  445|Homo sapiens histamine receptor H3 p...    30   4.7  
AJ296652-1|CAC51025.1|  445|Homo sapiens histamine h3 receptor p...    30   4.7  
AJ278250-1|CAC39434.1|  445|Homo sapiens histamine H3 receptor p...    30   4.7  
AF363791-1|AAK50040.1|  365|Homo sapiens histamine receptor H3S ...    30   4.7  
AF346904-1|AAM43829.1|  309|Homo sapiens histamine H3 receptor i...    30   4.7  
AF346903-1|AAM43828.1|  200|Homo sapiens histamine H3 receptor i...    30   4.7  
AF321913-1|AAL71914.1|  373|Homo sapiens histamine H3 receptor i...    30   4.7  
AF321912-1|AAL71913.1|  301|Homo sapiens histamine H3 receptor i...    30   4.7  
AF321911-1|AAL71912.1|  365|Homo sapiens histamine H3 receptor i...    30   4.7  
AF321910-1|AAL71911.1|  445|Homo sapiens histamine H3 receptor i...    30   4.7  
AF140538-1|AAD38151.1|  445|Homo sapiens histamine H3 receptor p...    30   4.7  
AB045369-1|BAB20090.1|  453|Homo sapiens histamine H3 receptor H...    30   4.7  
AB019000-1|BAB17030.1|  453|Homo sapiens G-protein coupled recep...    30   4.7  

>BC096840-1|AAH96840.1|  445|Homo sapiens histamine receptor H3
           protein.
          Length = 445

 Score = 29.9 bits (64), Expect = 4.7
 Identities = 22/65 (33%), Positives = 36/65 (55%), Gaps = 3/65 (4%)
 Frame = +3

Query: 180 SKRWEDNLMRLNLSVD---IPHKHSPLSFAPDLLSGSRFRSGGRLCEARLLIGFVLATSS 350
           S R ++N   LNL++    +     PL + P +L+G R+  G  LC+  L++ ++L TSS
Sbjct: 64  SLRTQNNFFLLNLAISDFLVGAFCIPL-YVPYVLTG-RWTFGRGLCKLWLVVDYLLCTSS 121

Query: 351 GLNPV 365
             N V
Sbjct: 122 AFNIV 126


>AL078633-1|CAC04014.1|  445|Homo sapiens histamine receptor H3
           protein.
          Length = 445

 Score = 29.9 bits (64), Expect = 4.7
 Identities = 22/65 (33%), Positives = 36/65 (55%), Gaps = 3/65 (4%)
 Frame = +3

Query: 180 SKRWEDNLMRLNLSVD---IPHKHSPLSFAPDLLSGSRFRSGGRLCEARLLIGFVLATSS 350
           S R ++N   LNL++    +     PL + P +L+G R+  G  LC+  L++ ++L TSS
Sbjct: 64  SLRTQNNFFLLNLAISDFLVGAFCIPL-YVPYVLTG-RWTFGRGLCKLWLVVDYLLCTSS 121

Query: 351 GLNPV 365
             N V
Sbjct: 122 AFNIV 126


>AJ296652-1|CAC51025.1|  445|Homo sapiens histamine h3 receptor
           protein.
          Length = 445

 Score = 29.9 bits (64), Expect = 4.7
 Identities = 22/65 (33%), Positives = 36/65 (55%), Gaps = 3/65 (4%)
 Frame = +3

Query: 180 SKRWEDNLMRLNLSVD---IPHKHSPLSFAPDLLSGSRFRSGGRLCEARLLIGFVLATSS 350
           S R ++N   LNL++    +     PL + P +L+G R+  G  LC+  L++ ++L TSS
Sbjct: 64  SLRTQNNFFLLNLAISDFLVGAFCIPL-YVPYVLTG-RWTFGRGLCKLWLVVDYLLCTSS 121

Query: 351 GLNPV 365
             N V
Sbjct: 122 AFNIV 126


>AJ278250-1|CAC39434.1|  445|Homo sapiens histamine H3 receptor
           protein.
          Length = 445

 Score = 29.9 bits (64), Expect = 4.7
 Identities = 22/65 (33%), Positives = 36/65 (55%), Gaps = 3/65 (4%)
 Frame = +3

Query: 180 SKRWEDNLMRLNLSVD---IPHKHSPLSFAPDLLSGSRFRSGGRLCEARLLIGFVLATSS 350
           S R ++N   LNL++    +     PL + P +L+G R+  G  LC+  L++ ++L TSS
Sbjct: 64  SLRTQNNFFLLNLAISDFLVGAFCIPL-YVPYVLTG-RWTFGRGLCKLWLVVDYLLCTSS 121

Query: 351 GLNPV 365
             N V
Sbjct: 122 AFNIV 126


>AF363791-1|AAK50040.1|  365|Homo sapiens histamine receptor H3S
           protein.
          Length = 365

 Score = 29.9 bits (64), Expect = 4.7
 Identities = 22/65 (33%), Positives = 36/65 (55%), Gaps = 3/65 (4%)
 Frame = +3

Query: 180 SKRWEDNLMRLNLSVD---IPHKHSPLSFAPDLLSGSRFRSGGRLCEARLLIGFVLATSS 350
           S R ++N   LNL++    +     PL + P +L+G R+  G  LC+  L++ ++L TSS
Sbjct: 64  SLRTQNNFFLLNLAISDFLVGAFCIPL-YVPYVLTG-RWTFGRGLCKLWLVVDYLLCTSS 121

Query: 351 GLNPV 365
             N V
Sbjct: 122 AFNIV 126


>AF346904-1|AAM43829.1|  309|Homo sapiens histamine H3 receptor
           isoform 6 protein.
          Length = 309

 Score = 29.9 bits (64), Expect = 4.7
 Identities = 22/65 (33%), Positives = 36/65 (55%), Gaps = 3/65 (4%)
 Frame = +3

Query: 180 SKRWEDNLMRLNLSVD---IPHKHSPLSFAPDLLSGSRFRSGGRLCEARLLIGFVLATSS 350
           S R ++N   LNL++    +     PL + P +L+G R+  G  LC+  L++ ++L TSS
Sbjct: 64  SLRTQNNFFLLNLAISDFLVGAFCIPL-YVPYVLTG-RWTFGRGLCKLWLVVDYLLCTSS 121

Query: 351 GLNPV 365
             N V
Sbjct: 122 AFNIV 126


>AF346903-1|AAM43828.1|  200|Homo sapiens histamine H3 receptor
           isoform 5 protein.
          Length = 200

 Score = 29.9 bits (64), Expect = 4.7
 Identities = 22/65 (33%), Positives = 36/65 (55%), Gaps = 3/65 (4%)
 Frame = +3

Query: 180 SKRWEDNLMRLNLSVD---IPHKHSPLSFAPDLLSGSRFRSGGRLCEARLLIGFVLATSS 350
           S R ++N   LNL++    +     PL + P +L+G R+  G  LC+  L++ ++L TSS
Sbjct: 64  SLRTQNNFFLLNLAISDFLVGAFCIPL-YVPYVLTG-RWTFGRGLCKLWLVVDYLLCTSS 121

Query: 351 GLNPV 365
             N V
Sbjct: 122 AFNIV 126


>AF321913-1|AAL71914.1|  373|Homo sapiens histamine H3 receptor
           isoform 4 protein.
          Length = 373

 Score = 29.9 bits (64), Expect = 4.7
 Identities = 22/65 (33%), Positives = 36/65 (55%), Gaps = 3/65 (4%)
 Frame = +3

Query: 180 SKRWEDNLMRLNLSVD---IPHKHSPLSFAPDLLSGSRFRSGGRLCEARLLIGFVLATSS 350
           S R ++N   LNL++    +     PL + P +L+G R+  G  LC+  L++ ++L TSS
Sbjct: 64  SLRTQNNFFLLNLAISDFLVGAFCIPL-YVPYVLTG-RWTFGRGLCKLWLVVDYLLCTSS 121

Query: 351 GLNPV 365
             N V
Sbjct: 122 AFNIV 126


>AF321912-1|AAL71913.1|  301|Homo sapiens histamine H3 receptor
           isoform 3 protein.
          Length = 301

 Score = 29.9 bits (64), Expect = 4.7
 Identities = 22/65 (33%), Positives = 36/65 (55%), Gaps = 3/65 (4%)
 Frame = +3

Query: 180 SKRWEDNLMRLNLSVD---IPHKHSPLSFAPDLLSGSRFRSGGRLCEARLLIGFVLATSS 350
           S R ++N   LNL++    +     PL + P +L+G R+  G  LC+  L++ ++L TSS
Sbjct: 64  SLRTQNNFFLLNLAISDFLVGAFCIPL-YVPYVLTG-RWTFGRGLCKLWLVVDYLLCTSS 121

Query: 351 GLNPV 365
             N V
Sbjct: 122 AFNIV 126


>AF321911-1|AAL71912.1|  365|Homo sapiens histamine H3 receptor
           isoform 2 protein.
          Length = 365

 Score = 29.9 bits (64), Expect = 4.7
 Identities = 22/65 (33%), Positives = 36/65 (55%), Gaps = 3/65 (4%)
 Frame = +3

Query: 180 SKRWEDNLMRLNLSVD---IPHKHSPLSFAPDLLSGSRFRSGGRLCEARLLIGFVLATSS 350
           S R ++N   LNL++    +     PL + P +L+G R+  G  LC+  L++ ++L TSS
Sbjct: 64  SLRTQNNFFLLNLAISDFLVGAFCIPL-YVPYVLTG-RWTFGRGLCKLWLVVDYLLCTSS 121

Query: 351 GLNPV 365
             N V
Sbjct: 122 AFNIV 126


>AF321910-1|AAL71911.1|  445|Homo sapiens histamine H3 receptor
           isoform 1 protein.
          Length = 445

 Score = 29.9 bits (64), Expect = 4.7
 Identities = 22/65 (33%), Positives = 36/65 (55%), Gaps = 3/65 (4%)
 Frame = +3

Query: 180 SKRWEDNLMRLNLSVD---IPHKHSPLSFAPDLLSGSRFRSGGRLCEARLLIGFVLATSS 350
           S R ++N   LNL++    +     PL + P +L+G R+  G  LC+  L++ ++L TSS
Sbjct: 64  SLRTQNNFFLLNLAISDFLVGAFCIPL-YVPYVLTG-RWTFGRGLCKLWLVVDYLLCTSS 121

Query: 351 GLNPV 365
             N V
Sbjct: 122 AFNIV 126


>AF140538-1|AAD38151.1|  445|Homo sapiens histamine H3 receptor
           protein.
          Length = 445

 Score = 29.9 bits (64), Expect = 4.7
 Identities = 22/65 (33%), Positives = 36/65 (55%), Gaps = 3/65 (4%)
 Frame = +3

Query: 180 SKRWEDNLMRLNLSVD---IPHKHSPLSFAPDLLSGSRFRSGGRLCEARLLIGFVLATSS 350
           S R ++N   LNL++    +     PL + P +L+G R+  G  LC+  L++ ++L TSS
Sbjct: 64  SLRTQNNFFLLNLAISDFLVGAFCIPL-YVPYVLTG-RWTFGRGLCKLWLVVDYLLCTSS 121

Query: 351 GLNPV 365
             N V
Sbjct: 122 AFNIV 126


>AB045369-1|BAB20090.1|  453|Homo sapiens histamine H3 receptor HH3R
           protein.
          Length = 453

 Score = 29.9 bits (64), Expect = 4.7
 Identities = 22/65 (33%), Positives = 36/65 (55%), Gaps = 3/65 (4%)
 Frame = +3

Query: 180 SKRWEDNLMRLNLSVD---IPHKHSPLSFAPDLLSGSRFRSGGRLCEARLLIGFVLATSS 350
           S R ++N   LNL++    +     PL + P +L+G R+  G  LC+  L++ ++L TSS
Sbjct: 64  SLRTQNNFFLLNLAISDFLVGAFCIPL-YVPYVLTG-RWTFGRGLCKLWLVVDYLLCTSS 121

Query: 351 GLNPV 365
             N V
Sbjct: 122 AFNIV 126


>AB019000-1|BAB17030.1|  453|Homo sapiens G-protein coupled receptor
           protein.
          Length = 453

 Score = 29.9 bits (64), Expect = 4.7
 Identities = 22/65 (33%), Positives = 36/65 (55%), Gaps = 3/65 (4%)
 Frame = +3

Query: 180 SKRWEDNLMRLNLSVD---IPHKHSPLSFAPDLLSGSRFRSGGRLCEARLLIGFVLATSS 350
           S R ++N   LNL++    +     PL + P +L+G R+  G  LC+  L++ ++L TSS
Sbjct: 64  SLRTQNNFFLLNLAISDFLVGAFCIPL-YVPYVLTG-RWTFGRGLCKLWLVVDYLLCTSS 121

Query: 351 GLNPV 365
             N V
Sbjct: 122 AFNIV 126


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 57,629,584
Number of Sequences: 237096
Number of extensions: 1014868
Number of successful extensions: 4232
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 4211
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4232
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 4156838854
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)