Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--2306
(428 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1al... 181 3e-48
X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alp... 180 6e-48
AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor 1-a... 63 1e-12
EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor 1-a... 46 2e-07
AF069739-1|AAC63272.2| 690|Apis mellifera translation initiatio... 25 0.27
AY739659-1|AAU85298.1| 288|Apis mellifera hyperpolarization-act... 25 0.36
AY739658-1|AAU85297.1| 664|Apis mellifera hyperpolarization-act... 25 0.36
AY280848-1|AAQ16312.1| 632|Apis mellifera hyperpolarization-act... 25 0.36
AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9 methylt... 24 0.63
EF540769-1|ABQ14707.1| 620|Apis mellifera adenosine deaminase p... 22 2.5
DQ855484-1|ABH88171.1| 130|Apis mellifera chemosensory protein ... 21 5.8
AJ973401-1|CAJ01448.1| 130|Apis mellifera hypothetical protein ... 21 5.8
AF481963-1|AAN59784.1| 130|Apis mellifera antennal-specific pro... 21 5.8
DQ244074-1|ABB36784.1| 517|Apis mellifera cytochrome P450 monoo... 21 7.7
>AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1alpha
F2 protein.
Length = 461
Score = 181 bits (441), Expect = 3e-48
Identities = 90/114 (78%), Positives = 93/114 (81%)
Frame = +2
Query: 29 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 208
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKIHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 209 DKLKAERERGITIDIALWKFETSKSMLPSLMLLDTEISSRT*SQEPFQADCAVL 370
DKLKAERERGITIDIALWKFETSK + + + QADCAVL
Sbjct: 61 DKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVL 114
Score = 22.2 bits (45), Expect = 2.5
Identities = 12/19 (63%), Positives = 13/19 (68%)
Frame = +3
Query: 369 LIVACRYPGKFEAGFFKNG 425
LIVA G+FEAG KNG
Sbjct: 114 LIVAAG-TGEFEAGISKNG 131
>X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alpha
protein.
Length = 461
Score = 180 bits (438), Expect = 6e-48
Identities = 89/114 (78%), Positives = 93/114 (81%)
Frame = +2
Query: 29 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 208
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKIHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 209 DKLKAERERGITIDIALWKFETSKSMLPSLMLLDTEISSRT*SQEPFQADCAVL 370
DKLKAERERGITIDIALWKFET+K + + + QADCAVL
Sbjct: 61 DKLKAERERGITIDIALWKFETAKYYVTIIDAPGHRDFIKNMITGTSQADCAVL 114
Score = 22.2 bits (45), Expect = 2.5
Identities = 12/19 (63%), Positives = 13/19 (68%)
Frame = +3
Query: 369 LIVACRYPGKFEAGFFKNG 425
LIVA G+FEAG KNG
Sbjct: 114 LIVAAGI-GEFEAGISKNG 131
>AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor
1-alpha protein.
Length = 274
Score = 63.3 bits (147), Expect = 1e-12
Identities = 34/57 (59%), Positives = 37/57 (64%)
Frame = +2
Query: 200 WVLDKLKAERERGITIDIALWKFETSKSMLPSLMLLDTEISSRT*SQEPFQADCAVL 370
WVLDKLKAERERGITIDIALWKFETSK + + + QADCAVL
Sbjct: 1 WVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVL 57
Score = 22.2 bits (45), Expect = 2.5
Identities = 12/19 (63%), Positives = 13/19 (68%)
Frame = +3
Query: 369 LIVACRYPGKFEAGFFKNG 425
LIVA G+FEAG KNG
Sbjct: 57 LIVAAG-TGEFEAGISKNG 74
>EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor
1-alpha protein.
Length = 172
Score = 46.0 bits (104), Expect = 2e-07
Identities = 20/21 (95%), Positives = 20/21 (95%)
Frame = +1
Query: 283 YVTIIDASGHRDFIKNMITGT 345
YVTIIDA GHRDFIKNMITGT
Sbjct: 13 YVTIIDAPGHRDFIKNMITGT 33
Score = 30.3 bits (65), Expect = 0.010
Identities = 18/41 (43%), Positives = 21/41 (51%)
Frame = +2
Query: 248 DIALWKFETSKSMLPSLMLLDTEISSRT*SQEPFQADCAVL 370
DIALWKFETSK + + + QADCAVL
Sbjct: 1 DIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVL 41
Score = 22.2 bits (45), Expect = 2.5
Identities = 12/19 (63%), Positives = 13/19 (68%)
Frame = +3
Query: 369 LIVACRYPGKFEAGFFKNG 425
LIVA G+FEAG KNG
Sbjct: 41 LIVAAG-TGEFEAGISKNG 58
>AF069739-1|AAC63272.2| 690|Apis mellifera translation initiation
factor 2 protein.
Length = 690
Score = 25.4 bits (53), Expect = 0.27
Identities = 9/18 (50%), Positives = 13/18 (72%)
Frame = +2
Query: 41 KTHINIVVIGHVDSGKST 94
K H + ++GHVD GK+T
Sbjct: 143 KRHPIVTIMGHVDHGKTT 160
>AY739659-1|AAU85298.1| 288|Apis mellifera
hyperpolarization-activated ion channelvariant T
protein.
Length = 288
Score = 25.0 bits (52), Expect = 0.36
Identities = 11/41 (26%), Positives = 22/41 (53%)
Frame = +2
Query: 293 SLMLLDTEISSRT*SQEPFQADCAVLNRSLPVPGEIRSWFF 415
++ L+D ++ RT + A+ +L+ L +R+WFF
Sbjct: 130 TIFLIDIVVNFRTGIMQQDNAEQVILDPKLIAKHYLRTWFF 170
>AY739658-1|AAU85297.1| 664|Apis mellifera
hyperpolarization-activated ion channelvariant L
protein.
Length = 664
Score = 25.0 bits (52), Expect = 0.36
Identities = 11/41 (26%), Positives = 22/41 (53%)
Frame = +2
Query: 293 SLMLLDTEISSRT*SQEPFQADCAVLNRSLPVPGEIRSWFF 415
++ L+D ++ RT + A+ +L+ L +R+WFF
Sbjct: 130 TIFLIDIVVNFRTGIMQQDNAEQVILDPKLIAKHYLRTWFF 170
>AY280848-1|AAQ16312.1| 632|Apis mellifera
hyperpolarization-activated ion channel protein.
Length = 632
Score = 25.0 bits (52), Expect = 0.36
Identities = 11/41 (26%), Positives = 22/41 (53%)
Frame = +2
Query: 293 SLMLLDTEISSRT*SQEPFQADCAVLNRSLPVPGEIRSWFF 415
++ L+D ++ RT + A+ +L+ L +R+WFF
Sbjct: 130 TIFLIDIVVNFRTGIMQQDNAEQVILDPKLIAKHYLRTWFF 170
>AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9
methyltransferase protein.
Length = 683
Score = 24.2 bits (50), Expect = 0.63
Identities = 11/15 (73%), Positives = 11/15 (73%)
Frame = +2
Query: 50 INIVVIGHVDSGKST 94
INI IGHV GKST
Sbjct: 43 INIGTIGHVAHGKST 57
>EF540769-1|ABQ14707.1| 620|Apis mellifera adenosine deaminase
protein.
Length = 620
Score = 22.2 bits (45), Expect = 2.5
Identities = 9/18 (50%), Positives = 11/18 (61%)
Frame = -3
Query: 375 RLSTAQSA*KGSCDHVLD 322
+LST + A K C H LD
Sbjct: 562 KLSTIEDADKNQCRHYLD 579
>DQ855484-1|ABH88171.1| 130|Apis mellifera chemosensory protein 3
protein.
Length = 130
Score = 21.0 bits (42), Expect = 5.8
Identities = 8/16 (50%), Positives = 13/16 (81%)
Frame = +2
Query: 131 DKRTIEKFEKEAQEMG 178
DK+ KFE+EA+++G
Sbjct: 112 DKKYRVKFEEEAKKLG 127
>AJ973401-1|CAJ01448.1| 130|Apis mellifera hypothetical protein
protein.
Length = 130
Score = 21.0 bits (42), Expect = 5.8
Identities = 8/16 (50%), Positives = 13/16 (81%)
Frame = +2
Query: 131 DKRTIEKFEKEAQEMG 178
DK+ KFE+EA+++G
Sbjct: 112 DKKFRVKFEEEAKKLG 127
>AF481963-1|AAN59784.1| 130|Apis mellifera antennal-specific
protein 3c precursor protein.
Length = 130
Score = 21.0 bits (42), Expect = 5.8
Identities = 8/16 (50%), Positives = 13/16 (81%)
Frame = +2
Query: 131 DKRTIEKFEKEAQEMG 178
DK+ KFE+EA+++G
Sbjct: 112 DKKYRVKFEEEAKKLG 127
>DQ244074-1|ABB36784.1| 517|Apis mellifera cytochrome P450
monooxygenase protein.
Length = 517
Score = 20.6 bits (41), Expect = 7.7
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = -3
Query: 42 FSLPIFG*SRITNC 1
FSLPIFG I +C
Sbjct: 57 FSLPIFGTRWIFSC 70
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 116,847
Number of Sequences: 438
Number of extensions: 2380
Number of successful extensions: 23
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 11121030
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)
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