Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--2303
         (500 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q7PXL2 Cluster: ENSANGP00000012246; n=1; Anopheles gamb...    34   2.1  
UniRef50_A7SHF0 Cluster: Predicted protein; n=1; Nematostella ve...    33   4.8  
UniRef50_Q5TPM4 Cluster: ENSANGP00000028549; n=1; Anopheles gamb...    32   8.3  

>UniRef50_Q7PXL2 Cluster: ENSANGP00000012246; n=1; Anopheles gambiae
           str. PEST|Rep: ENSANGP00000012246 - Anopheles gambiae
           str. PEST
          Length = 181

 Score = 33.9 bits (74), Expect = 2.1
 Identities = 17/40 (42%), Positives = 27/40 (67%), Gaps = 1/40 (2%)
 Frame = -3

Query: 162 HKKDDMMSAL-LMIENGSSIRMAAKTSKIP*TTL*RYVKT 46
           + K D+ +A+ L++E G+SIR AA    +P TTL  Y+K+
Sbjct: 17  YTKQDLKNAINLIVERGTSIRRAAFVCNVPRTTLSTYLKS 56


>UniRef50_A7SHF0 Cluster: Predicted protein; n=1; Nematostella
           vectensis|Rep: Predicted protein - Nematostella
           vectensis
          Length = 1157

 Score = 32.7 bits (71), Expect = 4.8
 Identities = 17/37 (45%), Positives = 25/37 (67%), Gaps = 1/37 (2%)
 Frame = -3

Query: 159 KKDDMMSALLMI-ENGSSIRMAAKTSKIP*TTL*RYV 52
           K DDM +A+  + +NG ++R AAK   IP TTL +Y+
Sbjct: 301 KGDDMKAAIHAVTKNGMAVRTAAKAYGIPRTTLKQYI 337


>UniRef50_Q5TPM4 Cluster: ENSANGP00000028549; n=1; Anopheles gambiae
           str. PEST|Rep: ENSANGP00000028549 - Anopheles gambiae
           str. PEST
          Length = 342

 Score = 31.9 bits (69), Expect = 8.3
 Identities = 20/51 (39%), Positives = 30/51 (58%), Gaps = 2/51 (3%)
 Frame = -3

Query: 195 MPRNKERKI*KHKKDD--MMSALLMIENGSSIRMAAKTSKIP*TTL*RYVK 49
           M RN  RK  +    D  + +A+L +++GSS +  A+   IP TTL RY+K
Sbjct: 1   MVRNYVRKSNRQSWTDQQLKTAILAVQSGSSQQSVAREFGIPRTTLDRYLK 51


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 462,824,856
Number of Sequences: 1657284
Number of extensions: 7900033
Number of successful extensions: 16015
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 15728
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16010
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 29691847201
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)