Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--2303
         (500 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK131253-1|BAD18432.1|  169|Homo sapiens protein ( Homo sapiens ...    30   5.2  
BC013129-1|AAH13129.1|  483|Homo sapiens chromosome 2 open readi...    29   9.1  
AY453410-1|AAR26725.1|  483|Homo sapiens XTP3-transactivated pro...    29   9.1  
AK001913-1|BAA91974.1|  483|Homo sapiens protein ( Homo sapiens ...    29   9.1  
AF131849-1|AAD20060.1|  306|Homo sapiens Unknown protein.              29   9.1  
AC007883-3|AAY24352.1|  483|Homo sapiens unknown protein.              29   9.1  

>AK131253-1|BAD18432.1|  169|Homo sapiens protein ( Homo sapiens
           cDNA FLJ16182 fis, clone BRTHA2002133. ).
          Length = 169

 Score = 29.9 bits (64), Expect = 5.2
 Identities = 13/34 (38%), Positives = 20/34 (58%)
 Frame = -3

Query: 258 SLFNDSFMLKINNIIDCFRMPMPRNKERKI*KHK 157
           SLF D+ +L I N+ DC + P   +K  K+  +K
Sbjct: 86  SLFADNMILHIENLKDCTKTPFELDKSSKVAGYK 119


>BC013129-1|AAH13129.1|  483|Homo sapiens chromosome 2 open reading
           frame 30 protein.
          Length = 483

 Score = 29.1 bits (62), Expect = 9.1
 Identities = 19/74 (25%), Positives = 34/74 (45%), Gaps = 2/74 (2%)
 Frame = -3

Query: 294 SEPVHCVLCE--PGSLFNDSFMLKINNIIDCFRMPMPRNKERKI*KHKKDDMMSALLMIE 121
           + PV+ + C+  PGS F    + ++    +  R+P  RNKE  +   K++   +    I 
Sbjct: 253 ASPVNDIFCQSLPGSPFKPLTLRQLEQQEEILRVPFRRNKEEDLQSTKEERFPAIHKSIA 312

Query: 120 NGSSIRMAAKTSKI 79
            GS   +   T+ I
Sbjct: 313 IGSQPVLTVGTTHI 326


>AY453410-1|AAR26725.1|  483|Homo sapiens XTP3-transactivated
           protein B protein.
          Length = 483

 Score = 29.1 bits (62), Expect = 9.1
 Identities = 19/74 (25%), Positives = 34/74 (45%), Gaps = 2/74 (2%)
 Frame = -3

Query: 294 SEPVHCVLCE--PGSLFNDSFMLKINNIIDCFRMPMPRNKERKI*KHKKDDMMSALLMIE 121
           + PV+ + C+  PGS F    + ++    +  R+P  RNKE  +   K++   +    I 
Sbjct: 253 ASPVNDIFCQSLPGSPFKPLTLRQLEQQEEILRVPFRRNKEEDLQSTKEERFPAIHKSIA 312

Query: 120 NGSSIRMAAKTSKI 79
            GS   +   T+ I
Sbjct: 313 IGSQPVLTVGTTHI 326


>AK001913-1|BAA91974.1|  483|Homo sapiens protein ( Homo sapiens
           cDNA FLJ11051 fis, clone PLACE1004629, weakly similar to
           PROTEIN OS-9 PRECURSOR. ).
          Length = 483

 Score = 29.1 bits (62), Expect = 9.1
 Identities = 19/74 (25%), Positives = 34/74 (45%), Gaps = 2/74 (2%)
 Frame = -3

Query: 294 SEPVHCVLCE--PGSLFNDSFMLKINNIIDCFRMPMPRNKERKI*KHKKDDMMSALLMIE 121
           + PV+ + C+  PGS F    + ++    +  R+P  RNKE  +   K++   +    I 
Sbjct: 253 ASPVNDIFCQSLPGSPFKPLTLRQLEQQEEILRVPFRRNKEEDLQSTKEERFPAIHKSIA 312

Query: 120 NGSSIRMAAKTSKI 79
            GS   +   T+ I
Sbjct: 313 IGSQPVLTVGTTHI 326


>AF131849-1|AAD20060.1|  306|Homo sapiens Unknown protein.
          Length = 306

 Score = 29.1 bits (62), Expect = 9.1
 Identities = 19/74 (25%), Positives = 34/74 (45%), Gaps = 2/74 (2%)
 Frame = -3

Query: 294 SEPVHCVLCE--PGSLFNDSFMLKINNIIDCFRMPMPRNKERKI*KHKKDDMMSALLMIE 121
           + PV+ + C+  PGS F    + ++    +  R+P  RNKE  +   K++   +    I 
Sbjct: 76  ASPVNDIFCQSLPGSPFKPLTLRQLEQQEEILRVPFRRNKEEDLQSTKEERFPAIHKSIA 135

Query: 120 NGSSIRMAAKTSKI 79
            GS   +   T+ I
Sbjct: 136 IGSQPVLTVGTTHI 149


>AC007883-3|AAY24352.1|  483|Homo sapiens unknown protein.
          Length = 483

 Score = 29.1 bits (62), Expect = 9.1
 Identities = 19/74 (25%), Positives = 34/74 (45%), Gaps = 2/74 (2%)
 Frame = -3

Query: 294 SEPVHCVLCE--PGSLFNDSFMLKINNIIDCFRMPMPRNKERKI*KHKKDDMMSALLMIE 121
           + PV+ + C+  PGS F    + ++    +  R+P  RNKE  +   K++   +    I 
Sbjct: 253 ASPVNDIFCQSLPGSPFKPLTLRQLEQQEEILRVPFRRNKEEDLQSTKEERFPAIHKSIA 312

Query: 120 NGSSIRMAAKTSKI 79
            GS   +   T+ I
Sbjct: 313 IGSQPVLTVGTTHI 326


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 68,577,603
Number of Sequences: 237096
Number of extensions: 1261435
Number of successful extensions: 1810
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1788
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1810
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4593178062
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)