Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--2302
(321 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AM292340-1|CAL23152.1| 355|Tribolium castaneum gustatory recept... 24 0.34
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ... 22 1.8
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ... 22 1.8
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ... 22 1.8
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ... 22 1.8
S73225-1|AAB30811.1| 327|Tribolium castaneum protein ( Triboliu... 21 2.4
EF633444-1|ABR32189.1| 721|Tribolium castaneum heat shock prote... 21 4.2
AF227923-1|AAF36721.1| 351|Tribolium castaneum abdominal-B prot... 20 5.5
X72339-1|CAA51066.1| 133|Tribolium castaneum abdominal protein. 20 7.3
AY695256-1|AAW21973.1| 168|Tribolium castaneum ventral nerve co... 20 7.3
AY074761-1|AAL71874.1| 314|Tribolium castaneum ultrabithorax pr... 20 7.3
AF146649-1|AAD38009.1| 96|Tribolium castaneum ultrathorax prot... 20 7.3
AF017415-2|AAB70263.1| 284|Tribolium castaneum abdominal-A prot... 20 7.3
AF017415-1|AAB70262.1| 343|Tribolium castaneum abdominal-AII pr... 20 7.3
U14732-1|AAC46491.1| 322|Tribolium castaneum fushi-tarazu protein. 19 9.7
EF117815-1|ABO38438.1| 535|Tribolium castaneum cryptochrome 2 p... 19 9.7
AY043293-1|AAK96033.1| 523|Tribolium castaneum homeodomain tran... 19 9.7
AY043292-2|AAK96032.1| 290|Tribolium castaneum homeodomain tran... 19 9.7
AM292372-1|CAL23184.2| 771|Tribolium castaneum gustatory recept... 19 9.7
AF321227-1|AAK16421.1| 290|Tribolium castaneum Ftz protein. 19 9.7
AF187069-1|AAF03889.1| 471|Tribolium castaneum proboscipedia or... 19 9.7
AF187068-1|AAF03888.1| 477|Tribolium castaneum proboscipedia or... 19 9.7
>AM292340-1|CAL23152.1| 355|Tribolium castaneum gustatory receptor
candidate 19 protein.
Length = 355
Score = 24.2 bits (50), Expect = 0.34
Identities = 24/88 (27%), Positives = 35/88 (39%), Gaps = 5/88 (5%)
Frame = -1
Query: 252 LACDLYVSYAFFVHVLHLRVANGTYSYA--SFSLLPSYVFLNPFLFLK*SFITKLWVQN- 82
L C Y YAF + +HL Y + F LL Y F F+ + L + +
Sbjct: 110 LLCVYYFYYAFIIFTVHLLFLLCIYYFVVPLFFLLCIYYFYCAFIIFTVHLLFLLCIYHF 169
Query: 81 -KNYKILKNRILDKCS-VCFNNHRQLLL 4
+ I +L C+ + FN H LL
Sbjct: 170 FCAFIIFTMHLLFCCAFIFFNMHLLFLL 197
Score = 22.2 bits (45), Expect = 1.4
Identities = 12/39 (30%), Positives = 17/39 (43%)
Frame = -1
Query: 252 LACDLYVSYAFFVHVLHLRVANGTYSYASFSLLPSYVFL 136
L C Y YAF + +HL + Y + LL F+
Sbjct: 235 LLCIYYFYYAFILFTVHLLLLVCIYYFYYMHLLFCCAFI 273
>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
variant 2 protein.
Length = 1558
Score = 21.8 bits (44), Expect = 1.8
Identities = 9/27 (33%), Positives = 17/27 (62%)
Frame = -1
Query: 153 PSYVFLNPFLFLK*SFITKLWVQNKNY 73
P VFLN F+ + ++I LW+ ++ +
Sbjct: 450 PPVVFLNDFISHQHAWIWLLWLLSQTW 476
>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
variant 1 protein.
Length = 1558
Score = 21.8 bits (44), Expect = 1.8
Identities = 9/27 (33%), Positives = 17/27 (62%)
Frame = -1
Query: 153 PSYVFLNPFLFLK*SFITKLWVQNKNY 73
P VFLN F+ + ++I LW+ ++ +
Sbjct: 450 PPVVFLNDFISHQHAWIWLLWLLSQTW 476
>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
CHS1B protein.
Length = 1558
Score = 21.8 bits (44), Expect = 1.8
Identities = 9/27 (33%), Positives = 17/27 (62%)
Frame = -1
Query: 153 PSYVFLNPFLFLK*SFITKLWVQNKNY 73
P VFLN F+ + ++I LW+ ++ +
Sbjct: 450 PPVVFLNDFISHQHAWIWLLWLLSQTW 476
>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
CHS1A protein.
Length = 1558
Score = 21.8 bits (44), Expect = 1.8
Identities = 9/27 (33%), Positives = 17/27 (62%)
Frame = -1
Query: 153 PSYVFLNPFLFLK*SFITKLWVQNKNY 73
P VFLN F+ + ++I LW+ ++ +
Sbjct: 450 PPVVFLNDFISHQHAWIWLLWLLSQTW 476
>S73225-1|AAB30811.1| 327|Tribolium castaneum protein ( Tribolium
castaneum homeodomainprotein mRNA, complete cds. ).
Length = 327
Score = 21.4 bits (43), Expect = 2.4
Identities = 8/13 (61%), Positives = 9/13 (69%)
Frame = -1
Query: 99 KLWVQNKNYKILK 61
K+W QNK KI K
Sbjct: 273 KIWFQNKRAKIKK 285
>EF633444-1|ABR32189.1| 721|Tribolium castaneum heat shock protein
90 protein.
Length = 721
Score = 20.6 bits (41), Expect = 4.2
Identities = 7/20 (35%), Positives = 12/20 (60%)
Frame = -1
Query: 87 QNKNYKILKNRILDKCSVCF 28
QNK K+++ ++ KC F
Sbjct: 394 QNKILKVIRKNLVKKCLELF 413
>AF227923-1|AAF36721.1| 351|Tribolium castaneum abdominal-B
protein.
Length = 351
Score = 20.2 bits (40), Expect = 5.5
Identities = 7/14 (50%), Positives = 9/14 (64%)
Frame = -1
Query: 99 KLWVQNKNYKILKN 58
K+W QN+ K KN
Sbjct: 288 KIWFQNRRMKNKKN 301
>X72339-1|CAA51066.1| 133|Tribolium castaneum abdominal protein.
Length = 133
Score = 19.8 bits (39), Expect = 7.3
Identities = 6/13 (46%), Positives = 9/13 (69%)
Frame = -1
Query: 99 KLWVQNKNYKILK 61
K+W QN+ K+ K
Sbjct: 51 KIWFQNRRMKLKK 63
>AY695256-1|AAW21973.1| 168|Tribolium castaneum ventral nerve cord
defective protein protein.
Length = 168
Score = 19.8 bits (39), Expect = 7.3
Identities = 6/10 (60%), Positives = 7/10 (70%)
Frame = -1
Query: 99 KLWVQNKNYK 70
K+W QN YK
Sbjct: 85 KIWFQNHRYK 94
>AY074761-1|AAL71874.1| 314|Tribolium castaneum ultrabithorax
protein.
Length = 314
Score = 19.8 bits (39), Expect = 7.3
Identities = 6/13 (46%), Positives = 9/13 (69%)
Frame = -1
Query: 99 KLWVQNKNYKILK 61
K+W QN+ K+ K
Sbjct: 268 KIWFQNRRMKLKK 280
>AF146649-1|AAD38009.1| 96|Tribolium castaneum ultrathorax
protein.
Length = 96
Score = 19.8 bits (39), Expect = 7.3
Identities = 6/13 (46%), Positives = 9/13 (69%)
Frame = -1
Query: 99 KLWVQNKNYKILK 61
K+W QN+ K+ K
Sbjct: 50 KIWFQNRRMKLKK 62
>AF017415-2|AAB70263.1| 284|Tribolium castaneum abdominal-A
protein.
Length = 284
Score = 19.8 bits (39), Expect = 7.3
Identities = 6/13 (46%), Positives = 9/13 (69%)
Frame = -1
Query: 99 KLWVQNKNYKILK 61
K+W QN+ K+ K
Sbjct: 202 KIWFQNRRMKLKK 214
>AF017415-1|AAB70262.1| 343|Tribolium castaneum abdominal-AII
protein.
Length = 343
Score = 19.8 bits (39), Expect = 7.3
Identities = 6/13 (46%), Positives = 9/13 (69%)
Frame = -1
Query: 99 KLWVQNKNYKILK 61
K+W QN+ K+ K
Sbjct: 261 KIWFQNRRMKLKK 273
>U14732-1|AAC46491.1| 322|Tribolium castaneum fushi-tarazu protein.
Length = 322
Score = 19.4 bits (38), Expect = 9.7
Identities = 8/22 (36%), Positives = 12/22 (54%)
Frame = -1
Query: 99 KLWVQNKNYKILKNRILDKCSV 34
K+W QN+ K K+ + SV
Sbjct: 228 KIWFQNRRMKAKKDTKFTEQSV 249
>EF117815-1|ABO38438.1| 535|Tribolium castaneum cryptochrome 2
protein.
Length = 535
Score = 19.4 bits (38), Expect = 9.7
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = -1
Query: 162 SLLPSYVFLNPFL 124
SLLPS L+P+L
Sbjct: 257 SLLPSQTGLSPYL 269
>AY043293-1|AAK96033.1| 523|Tribolium castaneum homeodomain
transcription factor Maxillopediaprotein.
Length = 523
Score = 19.4 bits (38), Expect = 9.7
Identities = 10/50 (20%), Positives = 22/50 (44%)
Frame = +1
Query: 109 RLFKKQEWVQKNIRRKQRKRSIRVGPVRHSKVKNVNEKGIGNIKIASESA 258
R+ KK V + ++ + + SK+ + N+K++ +SA
Sbjct: 178 RITKKANSVSVKVENRRNSPNSCEKKIGLSKISPKESQDAANVKLSPKSA 227
>AY043292-2|AAK96032.1| 290|Tribolium castaneum homeodomain
transcription factor Fushitarazu protein.
Length = 290
Score = 19.4 bits (38), Expect = 9.7
Identities = 8/22 (36%), Positives = 12/22 (54%)
Frame = -1
Query: 99 KLWVQNKNYKILKNRILDKCSV 34
K+W QN+ K K+ + SV
Sbjct: 228 KIWFQNRRMKAKKDTKFTEQSV 249
>AM292372-1|CAL23184.2| 771|Tribolium castaneum gustatory receptor
candidate 51 protein.
Length = 771
Score = 19.4 bits (38), Expect = 9.7
Identities = 5/17 (29%), Positives = 10/17 (58%)
Frame = +1
Query: 70 FIVFILYP*FCYKRLFK 120
F++F+ Y +C+ K
Sbjct: 540 FMIFVTYQLYCWSSFLK 556
>AF321227-1|AAK16421.1| 290|Tribolium castaneum Ftz protein.
Length = 290
Score = 19.4 bits (38), Expect = 9.7
Identities = 8/22 (36%), Positives = 12/22 (54%)
Frame = -1
Query: 99 KLWVQNKNYKILKNRILDKCSV 34
K+W QN+ K K+ + SV
Sbjct: 228 KIWFQNRRMKAKKDTKFTEQSV 249
>AF187069-1|AAF03889.1| 471|Tribolium castaneum proboscipedia
ortholog protein.
Length = 471
Score = 19.4 bits (38), Expect = 9.7
Identities = 10/50 (20%), Positives = 22/50 (44%)
Frame = +1
Query: 109 RLFKKQEWVQKNIRRKQRKRSIRVGPVRHSKVKNVNEKGIGNIKIASESA 258
R+ KK V + ++ + + SK+ + N+K++ +SA
Sbjct: 126 RITKKANSVSVKVENRRNSPNSCEKKIGLSKISPKESQDAANVKLSPKSA 175
>AF187068-1|AAF03888.1| 477|Tribolium castaneum proboscipedia
ortholog protein.
Length = 477
Score = 19.4 bits (38), Expect = 9.7
Identities = 10/50 (20%), Positives = 22/50 (44%)
Frame = +1
Query: 109 RLFKKQEWVQKNIRRKQRKRSIRVGPVRHSKVKNVNEKGIGNIKIASESA 258
R+ KK V + ++ + + SK+ + N+K++ +SA
Sbjct: 309 RITKKANSVSVKVENRRNSPNSCEKKIGLSKISPKESQDAANVKLSPKSA 358
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 55,145
Number of Sequences: 336
Number of extensions: 1020
Number of successful extensions: 23
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 122,585
effective HSP length: 49
effective length of database: 106,121
effective search space used: 6048897
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)
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