Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--2302
         (321 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U63556-1|AAB58821.1|  789|Drosophila melanogaster larval serum p...    27   7.1  
BT024223-1|ABC86285.1|  789|Drosophila melanogaster LP18812p pro...    27   7.1  
AY069163-1|AAL39308.1|  789|Drosophila melanogaster GH19329p pro...    27   7.1  
AE014134-182|AAF51434.1|  789|Drosophila melanogaster CG4178-PA ...    27   7.1  

>U63556-1|AAB58821.1|  789|Drosophila melanogaster larval serum
           protein 1 beta subunitprotein.
          Length = 789

 Score = 26.6 bits (56), Expect = 7.1
 Identities = 12/53 (22%), Positives = 26/53 (49%)
 Frame = -1

Query: 228 YAFFVHVLHLRVANGTYSYASFSLLPSYVFLNPFLFLK*SFITKLWVQNKNYK 70
           YA  + V+H    +G    + + + P + F + F+F    F  ++W++   Y+
Sbjct: 140 YALTMAVIHRNDFHGLMLPSIYEIFPQFFFNSKFVFEAEKFDYEMWMKMTMYE 192


>BT024223-1|ABC86285.1|  789|Drosophila melanogaster LP18812p
           protein.
          Length = 789

 Score = 26.6 bits (56), Expect = 7.1
 Identities = 12/53 (22%), Positives = 26/53 (49%)
 Frame = -1

Query: 228 YAFFVHVLHLRVANGTYSYASFSLLPSYVFLNPFLFLK*SFITKLWVQNKNYK 70
           YA  + V+H    +G    + + + P + F + F+F    F  ++W++   Y+
Sbjct: 140 YALTMAVIHRNDFHGLMLPSIYEIFPQFFFNSKFVFEAEKFDYEMWMKMTMYE 192


>AY069163-1|AAL39308.1|  789|Drosophila melanogaster GH19329p
           protein.
          Length = 789

 Score = 26.6 bits (56), Expect = 7.1
 Identities = 12/53 (22%), Positives = 26/53 (49%)
 Frame = -1

Query: 228 YAFFVHVLHLRVANGTYSYASFSLLPSYVFLNPFLFLK*SFITKLWVQNKNYK 70
           YA  + V+H    +G    + + + P + F + F+F    F  ++W++   Y+
Sbjct: 140 YALTMAVIHRNDFHGLMLPSIYEIFPQFFFNSKFVFEAEKFDYEMWMKMTMYE 192


>AE014134-182|AAF51434.1|  789|Drosophila melanogaster CG4178-PA
           protein.
          Length = 789

 Score = 26.6 bits (56), Expect = 7.1
 Identities = 12/53 (22%), Positives = 26/53 (49%)
 Frame = -1

Query: 228 YAFFVHVLHLRVANGTYSYASFSLLPSYVFLNPFLFLK*SFITKLWVQNKNYK 70
           YA  + V+H    +G    + + + P + F + F+F    F  ++W++   Y+
Sbjct: 140 YALTMAVIHRNDFHGLMLPSIYEIFPQFFFNSKFVFEAEKFDYEMWMKMTMYE 192


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,678,368
Number of Sequences: 53049
Number of extensions: 143303
Number of successful extensions: 498
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 488
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 498
length of database: 24,988,368
effective HSP length: 74
effective length of database: 21,062,742
effective search space used: 674007744
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)