Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--2300
         (463 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory recept...    22   2.4  
AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory recept...    22   2.4  
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    21   4.2  
EF532798-1|ABQ08060.1|   50|Tribolium castaneum acetylcholineste...    21   7.4  
EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4 prot...    21   7.4  
AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    20   9.7  
AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory recept...    20   9.7  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    20   9.7  
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    20   9.7  

>AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory receptor
           candidate 45 protein.
          Length = 379

 Score = 22.2 bits (45), Expect = 2.4
 Identities = 11/34 (32%), Positives = 15/34 (44%)
 Frame = -3

Query: 314 NIVLSRLTHVNYGSYKVRCAICRXIRKETSNACY 213
           N+ L   T V+     V C  C    K+T + CY
Sbjct: 280 NLCLVIYTLVSVSLVMVTCDACTIASKQTISWCY 313


>AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory receptor
           candidate 8 protein.
          Length = 379

 Score = 22.2 bits (45), Expect = 2.4
 Identities = 11/34 (32%), Positives = 15/34 (44%)
 Frame = -3

Query: 314 NIVLSRLTHVNYGSYKVRCAICRXIRKETSNACY 213
           N+ L   T V+     V C  C    K+T + CY
Sbjct: 280 NLCLVIYTLVSVSLVMVTCDACTIASKQTISWCY 313


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 21.4 bits (43), Expect = 4.2
 Identities = 7/18 (38%), Positives = 13/18 (72%)
 Frame = -3

Query: 269 KVRCAICRXIRKETSNAC 216
           K+  A+C+  RK+ S++C
Sbjct: 30  KLLDALCQSFRKQNSSSC 47


>EF532798-1|ABQ08060.1|   50|Tribolium castaneum
           acetylcholinesterase protein.
          Length = 50

 Score = 20.6 bits (41), Expect = 7.4
 Identities = 7/17 (41%), Positives = 13/17 (76%), Gaps = 1/17 (5%)
 Frame = -2

Query: 186 NKTTNVSSNCLF-NVYL 139
           N  TN+S +CL+ N+++
Sbjct: 4   NPNTNISEDCLYLNIWV 20


>EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4
           protein.
          Length = 475

 Score = 20.6 bits (41), Expect = 7.4
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = -2

Query: 456 CSANFYCIAFFSVFV 412
           CS  +YC+A+   FV
Sbjct: 434 CSIFYYCLAYNGGFV 448


>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 20.2 bits (40), Expect = 9.7
 Identities = 6/14 (42%), Positives = 9/14 (64%)
 Frame = -2

Query: 450 ANFYCIAFFSVFVY 409
           + F C+ F+S F Y
Sbjct: 77  SRFLCLPFYSYFFY 90


>AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory receptor
           candidate 31 protein.
          Length = 250

 Score = 20.2 bits (40), Expect = 9.7
 Identities = 7/21 (33%), Positives = 12/21 (57%)
 Frame = +2

Query: 38  NNKYNVDCKQYYSTNKYLIFT 100
           ++ +  D +Q+Y T    IFT
Sbjct: 59  SSSFEADLRQFYKTAYSAIFT 79


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 20.2 bits (40), Expect = 9.7
 Identities = 5/14 (35%), Positives = 10/14 (71%)
 Frame = -3

Query: 83  YWCCSIVYNPHYIY 42
           ++C SI +N H ++
Sbjct: 59  FYCVSITFNVHLLF 72


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 20.2 bits (40), Expect = 9.7
 Identities = 6/14 (42%), Positives = 9/14 (64%)
 Frame = -2

Query: 450 ANFYCIAFFSVFVY 409
           + F C+ F+S F Y
Sbjct: 33  SRFLCLPFYSYFFY 46


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 104,324
Number of Sequences: 336
Number of extensions: 2187
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 10616413
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)