Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--2299
         (636 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical prote...    27   0.50 
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    26   0.87 
AY330181-1|AAQ16287.1|  156|Anopheles gambiae odorant-binding pr...    25   2.0  
EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calc...    24   4.6  

>AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical protein
            protein.
          Length = 1645

 Score = 27.1 bits (57), Expect = 0.50
 Identities = 10/14 (71%), Positives = 10/14 (71%)
 Frame = -1

Query: 492  PIGADEGRGDHEGG 451
            P GAD  RGDH GG
Sbjct: 1149 PYGADVSRGDHRGG 1162


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 26.2 bits (55), Expect = 0.87
 Identities = 17/46 (36%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
 Frame = -1

Query: 456 GGRITATPRSSLRFVSGLGARLMVTSVRSQPVAKSAQPSSR-SPSA 322
           GG   A+P       S  GA L +TS +S     S  P++R SPS+
Sbjct: 710 GGHHLASPSPHHHLTSPHGAPLALTSSKSASTHPSPHPATRASPSS 755


>AY330181-1|AAQ16287.1|  156|Anopheles gambiae odorant-binding
           protein AgamOBP55 protein.
          Length = 156

 Score = 25.0 bits (52), Expect = 2.0
 Identities = 9/40 (22%), Positives = 18/40 (45%)
 Frame = +3

Query: 141 KVVLLIKHLIR*APIRLCSNSHRSELVTKF*YVLFHACYF 260
           +V  +++H     P R+C   H +  +     +  H CY+
Sbjct: 28  QVCCMVEHTFPQEPYRVCHEQHATPQMDNGTVMCIHQCYY 67


>EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calcium
           channel alpha2-delta subunit 1 protein.
          Length = 1256

 Score = 23.8 bits (49), Expect = 4.6
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = +2

Query: 371 DLTEVTIKRAPNPETNLNE 427
           DLTEV +    NP   +NE
Sbjct: 573 DLTEVELPEVDNPSNTINE 591


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 607,777
Number of Sequences: 2352
Number of extensions: 11623
Number of successful extensions: 16
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 62305095
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)