Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--2299
         (636 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M68866-1|AAA28879.1| 1348|Drosophila melanogaster stranded at se...    31   1.3  
AY051979-1|AAK93403.1| 1693|Drosophila melanogaster LD44801p pro...    31   1.3  
AE014297-574|AAN13346.1| 1348|Drosophila melanogaster CG2507-PA,...    31   1.3  
AE014297-573|AAF54052.2| 1693|Drosophila melanogaster CG2507-PB,...    31   1.3  
AE014134-271|AAF51357.1| 1316|Drosophila melanogaster CG14351-PA...    31   1.3  

>M68866-1|AAA28879.1| 1348|Drosophila melanogaster stranded at second
            protein.
          Length = 1348

 Score = 31.1 bits (67), Expect = 1.3
 Identities = 20/72 (27%), Positives = 36/72 (50%)
 Frame = -1

Query: 486  GADEGRGDHEGGRITATPRSSLRFVSGLGARLMVTSVRSQPVAKSAQPSSRSPSAFNINT 307
            G D+  GD+ G  +  +  ++L  +S L   L++T  R    A S  P  +S +A++ N 
Sbjct: 1278 GTDQPVGDYYGPLVVVSVIAALAIMSTLALLLIITRRRVHQTA-SITPPRKSDAAYD-NP 1335

Query: 306  IHELNIHQRNFN 271
             +++ I Q   N
Sbjct: 1336 SYKVEIQQETMN 1347


>AY051979-1|AAK93403.1| 1693|Drosophila melanogaster LD44801p protein.
          Length = 1693

 Score = 31.1 bits (67), Expect = 1.3
 Identities = 20/72 (27%), Positives = 36/72 (50%)
 Frame = -1

Query: 486  GADEGRGDHEGGRITATPRSSLRFVSGLGARLMVTSVRSQPVAKSAQPSSRSPSAFNINT 307
            G D+  GD+ G  +  +  ++L  +S L   L++T  R    A S  P  +S +A++ N 
Sbjct: 1623 GTDQPVGDYYGPLVVVSVIAALAIMSTLALLLIITRRRVHQTA-SITPPRKSDAAYD-NP 1680

Query: 306  IHELNIHQRNFN 271
             +++ I Q   N
Sbjct: 1681 SYKVEIQQETMN 1692


>AE014297-574|AAN13346.1| 1348|Drosophila melanogaster CG2507-PA,
            isoform A protein.
          Length = 1348

 Score = 31.1 bits (67), Expect = 1.3
 Identities = 20/72 (27%), Positives = 36/72 (50%)
 Frame = -1

Query: 486  GADEGRGDHEGGRITATPRSSLRFVSGLGARLMVTSVRSQPVAKSAQPSSRSPSAFNINT 307
            G D+  GD+ G  +  +  ++L  +S L   L++T  R    A S  P  +S +A++ N 
Sbjct: 1278 GTDQPVGDYYGPLVVVSVIAALAIMSTLALLLIITRRRVHQTA-SITPPRKSDAAYD-NP 1335

Query: 306  IHELNIHQRNFN 271
             +++ I Q   N
Sbjct: 1336 SYKVEIQQETMN 1347


>AE014297-573|AAF54052.2| 1693|Drosophila melanogaster CG2507-PB,
            isoform B protein.
          Length = 1693

 Score = 31.1 bits (67), Expect = 1.3
 Identities = 20/72 (27%), Positives = 36/72 (50%)
 Frame = -1

Query: 486  GADEGRGDHEGGRITATPRSSLRFVSGLGARLMVTSVRSQPVAKSAQPSSRSPSAFNINT 307
            G D+  GD+ G  +  +  ++L  +S L   L++T  R    A S  P  +S +A++ N 
Sbjct: 1623 GTDQPVGDYYGPLVVVSVIAALAIMSTLALLLIITRRRVHQTA-SITPPRKSDAAYD-NP 1680

Query: 306  IHELNIHQRNFN 271
             +++ I Q   N
Sbjct: 1681 SYKVEIQQETMN 1692


>AE014134-271|AAF51357.1| 1316|Drosophila melanogaster CG14351-PA
            protein.
          Length = 1316

 Score = 31.1 bits (67), Expect = 1.3
 Identities = 25/89 (28%), Positives = 39/89 (43%)
 Frame = -1

Query: 567  RRNRQDVTGNRVRIIIVAVCYTLIKPIGADEGRGDHEGGRITATPRSSLRFVSGLGARLM 388
            R++RQ +     R+   +   ++    G   G G + GG     P SSL  +SG+     
Sbjct: 847  RQSRQSLAAASERMSRASYAGSIHGGNGGGGGLGGNGGGGGNGLPVSSLMAMSGMVGGGG 906

Query: 387  VTSVRSQPVAKSAQPSSRSPSAFNINTIH 301
              S+ S   A+ ++P SRS    N   IH
Sbjct: 907  PASIASS--ARRSRPRSRSREQLNTTHIH 933


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,376,243
Number of Sequences: 53049
Number of extensions: 494044
Number of successful extensions: 1117
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1100
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1117
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2662347150
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)