Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--2299
         (636 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z19153-3|CAA79547.1|  301|Caenorhabditis elegans Hypothetical pr...    28   4.9  
U64848-12|AAY86244.1|  231|Caenorhabditis elegans Hypothetical p...    28   6.4  
AF022968-7|AAN84871.2|  188|Caenorhabditis elegans Hypothetical ...    28   6.4  

>Z19153-3|CAA79547.1|  301|Caenorhabditis elegans Hypothetical
           protein C38C10.3 protein.
          Length = 301

 Score = 28.3 bits (60), Expect = 4.9
 Identities = 17/69 (24%), Positives = 35/69 (50%)
 Frame = -1

Query: 498 IKPIGADEGRGDHEGGRITATPRSSLRFVSGLGARLMVTSVRSQPVAKSAQPSSRSPSAF 319
           ++P+   E +   +  ++TA P  +++  SGL +++  T+   +     A+PSS S S  
Sbjct: 68  VEPV-QKENQKPKDLNKMTAGPHIAVKNSSGLVSQISSTTSSERKRRTLARPSSSSESDL 126

Query: 318 NINTIHELN 292
            +  I + N
Sbjct: 127 KVGNIQQSN 135


>U64848-12|AAY86244.1|  231|Caenorhabditis elegans Hypothetical
           protein C50E3.14 protein.
          Length = 231

 Score = 27.9 bits (59), Expect = 6.4
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = +2

Query: 326 DGERDDGCALLATGCDLTE 382
           DG+    C   ATGCDLT+
Sbjct: 144 DGKHQSSCPTTATGCDLTK 162


>AF022968-7|AAN84871.2|  188|Caenorhabditis elegans Hypothetical
           protein C10F3.7 protein.
          Length = 188

 Score = 27.9 bits (59), Expect = 6.4
 Identities = 15/38 (39%), Positives = 22/38 (57%), Gaps = 4/38 (10%)
 Frame = +2

Query: 323 ADGERDDGCALLATGC----DLTEVTIKRAPNPETNLN 424
           + G++DD C LLA       D+T+   +R P P+TN N
Sbjct: 41  SSGKKDD-CVLLAPNSRIPFDITKFKCRREPMPQTNWN 77


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,394,032
Number of Sequences: 27780
Number of extensions: 252455
Number of successful extensions: 522
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 508
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 522
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1406256614
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)