Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--2297
         (599 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A6BZK9 Cluster: Putative uncharacterized protein; n=1; ...    35   1.3  
UniRef50_Q8EUP5 Cluster: Oligopeptide ABC transporter ATP-bindin...    33   5.1  
UniRef50_A5K057 Cluster: Putative uncharacterized protein; n=1; ...    33   5.1  
UniRef50_A6AL55 Cluster: Putative EF hand domain/PKD domain prot...    33   6.8  

>UniRef50_A6BZK9 Cluster: Putative uncharacterized protein; n=1;
           Planctomyces maris DSM 8797|Rep: Putative
           uncharacterized protein - Planctomyces maris DSM 8797
          Length = 244

 Score = 35.1 bits (77), Expect = 1.3
 Identities = 17/56 (30%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
 Frame = +2

Query: 239 PAKQIDRLSV*NRHVDVVAIRDIFTNNSQDN-IKKKKTMVLLLYPRHNVNVLGLYT 403
           PA+QID  S+  R + ++ +R I TN ++ + I + ++  L+ Y  H V+ +   T
Sbjct: 51  PAQQIDEHSITPREISIIDVRQIVTNTAKKHLIIRDESQPLMRYDSHEVSAIHTVT 106


>UniRef50_Q8EUP5 Cluster: Oligopeptide ABC transporter ATP-binding
           protein; n=1; Mycoplasma penetrans|Rep: Oligopeptide ABC
           transporter ATP-binding protein - Mycoplasma penetrans
          Length = 506

 Score = 33.1 bits (72), Expect = 5.1
 Identities = 16/55 (29%), Positives = 33/55 (60%)
 Frame = +2

Query: 197 IYPQTKHVIHTRSEPAKQIDRLSV*NRHVDVVAIRDIFTNNSQDNIKKKKTMVLL 361
           +Y +TK+   T SE  KQ+ +L+  N   ++   ++ + NN++ ++ KKK + +L
Sbjct: 226 VYNETKN---TLSERIKQLSQLNKGNYEAEIQEAKNTYINNTKKDVAKKKVIEIL 277


>UniRef50_A5K057 Cluster: Putative uncharacterized protein; n=1;
           Plasmodium vivax|Rep: Putative uncharacterized protein -
           Plasmodium vivax
          Length = 1394

 Score = 33.1 bits (72), Expect = 5.1
 Identities = 29/94 (30%), Positives = 49/94 (52%), Gaps = 8/94 (8%)
 Frame = -2

Query: 355 NHCFFFFNIVL----RVICENIPNSNHIYMSIL----NRQTINLFGWFTSSVDDMFCLRV 200
           N+ F  + I+     R+  EN PN+  + +S L    N +T+NLF +F   + D+F +  
Sbjct: 412 NNVFNIYKIIFILKERIGIEN-PNARQVILSWLLLFQNIKTVNLFEYFHFFISDLFFMLA 470

Query: 199 NQMYR*IRVRVC*MLPALMYTDKLMLTSSEQTRS 98
           +Q  R I+ +    L   +Y DK+  ++ EQ RS
Sbjct: 471 DQ-NRDIQRQANQCLD--LYVDKISTSNYEQVRS 501


>UniRef50_A6AL55 Cluster: Putative EF hand domain/PKD domain protein;
            n=1; Vibrio harveyi HY01|Rep: Putative EF hand domain/PKD
            domain protein - Vibrio harveyi HY01
          Length = 1215

 Score = 32.7 bits (71), Expect = 6.8
 Identities = 13/29 (44%), Positives = 17/29 (58%)
 Frame = +1

Query: 115  WKSTSTYLCTLKLATFSIREHVSSDTSDL 201
            W   STYL TLK   F + +HV  +T D+
Sbjct: 1082 WDDESTYLTTLKFDAFMLVDHVQYETEDM 1110


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 571,210,338
Number of Sequences: 1657284
Number of extensions: 11678030
Number of successful extensions: 23465
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 22810
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23457
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 42317807226
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)