Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--2297
(599 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AM292365-1|CAL23177.1| 313|Tribolium castaneum gustatory recept... 25 0.49
AM292325-1|CAL23137.2| 309|Tribolium castaneum gustatory recept... 25 0.49
AM712901-1|CAN84640.1| 205|Tribolium castaneum hypothetical pro... 22 3.4
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro... 21 6.0
AM292370-1|CAL23182.1| 418|Tribolium castaneum gustatory recept... 21 6.0
AM292361-1|CAL23173.2| 373|Tribolium castaneum gustatory recept... 21 6.0
AM292335-1|CAL23147.2| 374|Tribolium castaneum gustatory recept... 21 6.0
DQ493452-1|ABF48588.1| 305|Tribolium castaneum hedgehog protein. 21 7.9
AM292372-1|CAL23184.2| 771|Tribolium castaneum gustatory recept... 21 7.9
AM292351-1|CAL23163.2| 394|Tribolium castaneum gustatory recept... 21 7.9
AM292350-1|CAL23162.2| 429|Tribolium castaneum gustatory recept... 21 7.9
AM292328-1|CAL23140.2| 429|Tribolium castaneum gustatory recept... 21 7.9
>AM292365-1|CAL23177.1| 313|Tribolium castaneum gustatory receptor
candidate 44 protein.
Length = 313
Score = 25.0 bits (52), Expect = 0.49
Identities = 15/43 (34%), Positives = 22/43 (51%)
Frame = -1
Query: 464 NFTNYVGTKFFVFGHGLPNIQYITQAHLHCALDIITKPLFFFF 336
+F ++ T F+ F G Y Q ++H AL I + LF FF
Sbjct: 238 SFYFFISTFFYFFTTGNIIATYDKQFYIHNAL--IVRALFLFF 278
>AM292325-1|CAL23137.2| 309|Tribolium castaneum gustatory receptor
candidate 4 protein.
Length = 309
Score = 25.0 bits (52), Expect = 0.49
Identities = 15/43 (34%), Positives = 22/43 (51%)
Frame = -1
Query: 464 NFTNYVGTKFFVFGHGLPNIQYITQAHLHCALDIITKPLFFFF 336
+F ++ T F+ F G Y Q ++H AL I + LF FF
Sbjct: 234 SFYFFISTFFYFFTTGNIIATYDKQFYIHNAL--IVRALFLFF 274
>AM712901-1|CAN84640.1| 205|Tribolium castaneum hypothetical
protein protein.
Length = 205
Score = 22.2 bits (45), Expect = 3.4
Identities = 14/44 (31%), Positives = 21/44 (47%)
Frame = -2
Query: 412 LTSSI*PKHIYIVPWI**QNHCFFFFNIVLRVICENIPNSNHIY 281
LTSS+ H+ ++ H FFFF I I + N H++
Sbjct: 54 LTSSV-TLHVCFNSYMYAFTHIFFFFAICCDFIALIVVNIVHVF 96
>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
Length = 2700
Score = 21.4 bits (43), Expect = 6.0
Identities = 8/20 (40%), Positives = 10/20 (50%)
Frame = +1
Query: 181 SSDTSDLPANKTCHPHSK*T 240
+ D D P N CHP + T
Sbjct: 2272 NKDHCDWPENTECHPDASST 2291
>AM292370-1|CAL23182.1| 418|Tribolium castaneum gustatory receptor
candidate 49 protein.
Length = 418
Score = 21.4 bits (43), Expect = 6.0
Identities = 16/51 (31%), Positives = 22/51 (43%)
Frame = +2
Query: 44 QIAQKSYLHYKMH*RTRTTSSLFAGSQHQLICVH*SWQHLAYANTYLAIHL 196
+I + S+LHYK+ T S LF + I W YL IH+
Sbjct: 256 KIQELSHLHYKLANFTVKISGLF---EITTITAMVMWFGYVIDTMYLFIHI 303
>AM292361-1|CAL23173.2| 373|Tribolium castaneum gustatory receptor
candidate 40 protein.
Length = 373
Score = 21.4 bits (43), Expect = 6.0
Identities = 8/16 (50%), Positives = 8/16 (50%)
Frame = -2
Query: 352 HCFFFFNIVLRVICEN 305
HCF N V CEN
Sbjct: 159 HCFSMLNYVYSSKCEN 174
>AM292335-1|CAL23147.2| 374|Tribolium castaneum gustatory receptor
candidate 14 protein.
Length = 374
Score = 21.4 bits (43), Expect = 6.0
Identities = 16/51 (31%), Positives = 22/51 (43%)
Frame = +2
Query: 44 QIAQKSYLHYKMH*RTRTTSSLFAGSQHQLICVH*SWQHLAYANTYLAIHL 196
+I + S+LHYK+ T S LF + I W YL IH+
Sbjct: 212 KIQELSHLHYKLANFTVKISGLF---EITTITAMVMWFGYVIDTMYLFIHI 259
>DQ493452-1|ABF48588.1| 305|Tribolium castaneum hedgehog protein.
Length = 305
Score = 21.0 bits (42), Expect = 7.9
Identities = 6/17 (35%), Positives = 12/17 (70%)
Frame = -1
Query: 419 GLPNIQYITQAHLHCAL 369
G + Y ++AH+HC++
Sbjct: 81 GFDWVYYESRAHIHCSV 97
>AM292372-1|CAL23184.2| 771|Tribolium castaneum gustatory receptor
candidate 51 protein.
Length = 771
Score = 21.0 bits (42), Expect = 7.9
Identities = 6/9 (66%), Positives = 7/9 (77%)
Frame = +1
Query: 382 KCAWVIYWM 408
K WVIYW+
Sbjct: 55 KILWVIYWL 63
>AM292351-1|CAL23163.2| 394|Tribolium castaneum gustatory receptor
candidate 30 protein.
Length = 394
Score = 21.0 bits (42), Expect = 7.9
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = -2
Query: 157 LPALMYTDKLMLTSSEQTRSC 95
L + + D L+ T SEQ SC
Sbjct: 370 LVLMQFNDSLLETISEQIDSC 390
>AM292350-1|CAL23162.2| 429|Tribolium castaneum gustatory receptor
candidate 29 protein.
Length = 429
Score = 21.0 bits (42), Expect = 7.9
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = -2
Query: 157 LPALMYTDKLMLTSSEQTRSC 95
L + + D L+ T SEQ SC
Sbjct: 405 LVLMQFNDSLLETISEQIDSC 425
>AM292328-1|CAL23140.2| 429|Tribolium castaneum gustatory receptor
candidate 7 protein.
Length = 429
Score = 21.0 bits (42), Expect = 7.9
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = -2
Query: 157 LPALMYTDKLMLTSSEQTRSC 95
L + + D L+ T SEQ SC
Sbjct: 405 LVLMQFNDSLLETISEQIDSC 425
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 144,385
Number of Sequences: 336
Number of extensions: 3460
Number of successful extensions: 16
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15143945
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -