Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--2297
         (599 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE013599-2248|AAF58016.1| 1087|Drosophila melanogaster CG3896-PA...    30   2.8  
DQ138824-1|ABA86430.1|  832|Drosophila melanogaster CG3615 protein.    29   6.4  
BT006028-1|AAO85562.1|  845|Drosophila melanogaster RE14003p pro...    29   6.4  
AY050233-1|AAK84932.1|  363|Drosophila melanogaster SD01812p pro...    29   6.4  
AE013599-2246|AAF58018.1|  845|Drosophila melanogaster CG3615-PA...    29   6.4  

>AE013599-2248|AAF58016.1| 1087|Drosophila melanogaster CG3896-PA
           protein.
          Length = 1087

 Score = 29.9 bits (64), Expect = 2.8
 Identities = 17/36 (47%), Positives = 23/36 (63%), Gaps = 5/36 (13%)
 Frame = +1

Query: 319 LSRQY*KKKNNGFVIISKA--QC---KCAWVIYWML 411
           +SR    + +NGFVII++A  QC    CAWV+  ML
Sbjct: 285 ISRAIQYRASNGFVIIARACGQCLNFNCAWVLVLML 320


>DQ138824-1|ABA86430.1|  832|Drosophila melanogaster CG3615 protein.
          Length = 832

 Score = 28.7 bits (61), Expect = 6.4
 Identities = 15/37 (40%), Positives = 19/37 (51%)
 Frame = -1

Query: 575 SFYLKKKNQQ*SPKIQKTADARVNERPGTAA*HPRSP 465
           + YL + NQQ     Q   D   +ERPGT+   PR P
Sbjct: 770 ALYLHELNQQKRQARQSRIDEAEDERPGTSHWPPRPP 806


>BT006028-1|AAO85562.1|  845|Drosophila melanogaster RE14003p
           protein.
          Length = 845

 Score = 28.7 bits (61), Expect = 6.4
 Identities = 15/37 (40%), Positives = 19/37 (51%)
 Frame = -1

Query: 575 SFYLKKKNQQ*SPKIQKTADARVNERPGTAA*HPRSP 465
           + YL + NQQ     Q   D   +ERPGT+   PR P
Sbjct: 777 ALYLHELNQQKRQARQSRIDEAEDERPGTSHWPPRPP 813


>AY050233-1|AAK84932.1|  363|Drosophila melanogaster SD01812p
           protein.
          Length = 363

 Score = 28.7 bits (61), Expect = 6.4
 Identities = 15/37 (40%), Positives = 19/37 (51%)
 Frame = -1

Query: 575 SFYLKKKNQQ*SPKIQKTADARVNERPGTAA*HPRSP 465
           + YL + NQQ     Q   D   +ERPGT+   PR P
Sbjct: 295 ALYLHELNQQKRQARQSRIDEAEDERPGTSHWPPRPP 331


>AE013599-2246|AAF58018.1|  845|Drosophila melanogaster CG3615-PA
           protein.
          Length = 845

 Score = 28.7 bits (61), Expect = 6.4
 Identities = 15/37 (40%), Positives = 19/37 (51%)
 Frame = -1

Query: 575 SFYLKKKNQQ*SPKIQKTADARVNERPGTAA*HPRSP 465
           + YL + NQQ     Q   D   +ERPGT+   PR P
Sbjct: 777 ALYLHELNQQKRQARQSRIDEAEDERPGTSHWPPRPP 813


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,746,489
Number of Sequences: 53049
Number of extensions: 551166
Number of successful extensions: 887
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 873
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 887
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2441585082
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)