Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--2292
(505 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_02_0058 + 7879859-7879951,7880844-7881078,7881165-7881535,788... 291 3e-79
03_05_0974 + 29324025-29324117,29325064-29325298,29325385-293257... 287 3e-78
07_03_0994 + 23190344-23190456,23191367-23191581,23191663-231918... 272 8e-74
03_02_0186 - 6243487-6243799,6243892-6244400,6244495-6244557,624... 182 2e-46
05_04_0306 + 20058640-20059159,20060406-20060819,20060921-200611... 149 2e-36
01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349 144 4e-35
06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379 142 2e-34
03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998 140 6e-34
03_01_0034 + 318432-318825,318902-319851 140 6e-34
02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467 139 1e-33
01_06_1060 + 34162161-34162554,34162613-34162675,34163262-341635... 132 2e-31
03_05_0575 + 25747813-25748206,25748567-25748614,25750296-257505... 124 3e-29
05_01_0412 - 3248405-3248458,3248533-3248637,3248950-3249078,324... 109 1e-24
04_01_0383 + 5085697-5085724,5085816-5085927,5087249-5087285,508... 31 0.69
01_01_0524 - 3845637-3845727,3845803-3845896,3846415-3846497,384... 30 0.92
05_07_0299 - 29073900-29073984,29074125-29074158,29074269-290743... 29 1.6
10_03_0016 - 7099862-7099967,7100059-7100357,7101862-7102171,710... 29 2.1
08_01_0312 + 2764744-2767390,2767632-2767990 29 2.1
12_02_0399 - 18600444-18600591,18600626-18601656 28 3.7
07_03_0483 - 18605176-18606118,18606353-18606482,18606609-18606738 28 3.7
03_05_0246 + 22333172-22333417 28 3.7
02_05_1147 - 34447519-34448042,34448126-34449092,34449458-344496... 28 3.7
01_05_0685 + 24273331-24273569,24275429-24275465,24275739-242758... 28 3.7
10_08_0253 - 16196275-16196307,16196425-16196550,16196643-161967... 27 6.5
06_01_0631 - 4605111-4605482,4605571-4605903,4605940-4605977,460... 27 6.5
05_01_0162 - 1095020-1095202,1096114-1096188,1096939-1097039,109... 27 6.5
08_01_0935 - 9218271-9219860,9219959-9220232,9220506-9221767 27 8.6
07_03_0686 + 20697493-20697927 27 8.6
07_01_0284 - 2082249-2082256,2082496-2083009 27 8.6
04_04_1189 + 31586991-31587291,31587358-31587397,31587449-315875... 27 8.6
02_05_0220 - 26885502-26885561,26885940-26886739,26887055-268874... 27 8.6
>11_02_0058 +
7879859-7879951,7880844-7881078,7881165-7881535,
7881648-7882304
Length = 451
Score = 291 bits (713), Expect = 3e-79
Identities = 126/143 (88%), Positives = 138/143 (96%)
Frame = +2
Query: 77 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 256
MRECIS+H+GQAG+Q+GNACWELYCLEHGIQPDGQMP DKT+GGGDD+FNTFFSETGAGK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGK 60
Query: 257 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 436
HVPRAVFVDLEPTV+DEVRTG YRQLFHPEQLI+GKEDAANN+ARGHYTIGKEIVDL LD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGDYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 120
Query: 437 RIRKLADQCTGLQGFLIFHSFGG 505
RIRKLAD CTGLQGFL+F++ GG
Sbjct: 121 RIRKLADNCTGLQGFLVFNAVGG 143
>03_05_0974 +
29324025-29324117,29325064-29325298,29325385-29325755,
29325864-29326520
Length = 451
Score = 287 bits (704), Expect = 3e-78
Identities = 124/143 (86%), Positives = 137/143 (95%)
Frame = +2
Query: 77 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 256
MRECIS+H+GQAG+Q+GNACWELYCLEHGIQ DGQMP+D+T+GGGDD+FNTFFSETGAGK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQADGQMPSDRTVGGGDDAFNTFFSETGAGK 60
Query: 257 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 436
HVPRAVFVDLEPTV+DEVRTG YRQLFHPEQLI GKEDAANN+ARGHYTIGKEIVDL LD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGCYRQLFHPEQLINGKEDAANNFARGHYTIGKEIVDLCLD 120
Query: 437 RIRKLADQCTGLQGFLIFHSFGG 505
RIRKLAD CTGLQGFL+F++ GG
Sbjct: 121 RIRKLADNCTGLQGFLVFNAVGG 143
>07_03_0994 +
23190344-23190456,23191367-23191581,23191663-23191862,
23192420-23192928,23193048-23193363
Length = 450
Score = 272 bits (668), Expect = 8e-74
Identities = 116/143 (81%), Positives = 134/143 (93%)
Frame = +2
Query: 77 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 256
MRE IS+H+GQAG+Q+GNACWELYCLEHGI+PDG MP+D T+G D+FNTFFSETGAGK
Sbjct: 1 MREIISIHIGQAGIQVGNACWELYCLEHGIEPDGTMPSDTTVGVAHDAFNTFFSETGAGK 60
Query: 257 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 436
HVPRA+FVDLEPTV+DEVRTG+YRQLFHPEQLI+GKEDAANN+ARGHYT+GKEIVDL LD
Sbjct: 61 HVPRAIFVDLEPTVIDEVRTGSYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLD 120
Query: 437 RIRKLADQCTGLQGFLIFHSFGG 505
R+RKLAD CTGLQGFL+F++ GG
Sbjct: 121 RVRKLADNCTGLQGFLVFNAVGG 143
>03_02_0186 -
6243487-6243799,6243892-6244400,6244495-6244557,
6245482-6245681,6246125-6246519,6246776-6246888
Length = 530
Score = 182 bits (442), Expect = 2e-46
Identities = 80/106 (75%), Positives = 95/106 (89%)
Frame = +2
Query: 188 TDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKE 367
+D T G D+FNTFFSET +GKHVPRA+FVDLEPTV+DEV+TG YRQLFHPEQLI+ KE
Sbjct: 98 SDTTPGIARDAFNTFFSETSSGKHVPRALFVDLEPTVIDEVKTGPYRQLFHPEQLISYKE 157
Query: 368 DAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHSFGG 505
DAANN+ARGHYT+G+E+VDL LDR+RKLAD CTGLQGFL+F++ GG
Sbjct: 158 DAANNFARGHYTVGREVVDLCLDRLRKLADNCTGLQGFLVFNAVGG 203
Score = 81.4 bits (192), Expect = 4e-16
Identities = 31/39 (79%), Positives = 36/39 (92%)
Frame = +2
Query: 77 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTD 193
MRE IS+H+GQAG+Q+GN+CWELYCLEHGIQPDG MP D
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGLMPRD 39
>05_04_0306 +
20058640-20059159,20060406-20060819,20060921-20061190,
20062179-20062849
Length = 624
Score = 149 bits (360), Expect = 2e-36
Identities = 69/149 (46%), Positives = 94/149 (63%)
Frame = +2
Query: 59 KKTQIKMRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFS 238
KK + KMRE + + GQ G QIG+ WE+ C EHGI P G+ + + N +++
Sbjct: 175 KKGEEKMREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTGRYAGTSDLQL--ERVNVYYN 232
Query: 239 ETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEI 418
E G+ VPRAV +DLEP +D VRTG Y Q+F P+ + G+ A NN+A+GHYT G E+
Sbjct: 233 EASCGRFVPRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL 292
Query: 419 VDLVLDRIRKLADQCTGLQGFLIFHSFGG 505
+D VLD +RK A+ C LQGF + HS GG
Sbjct: 293 IDSVLDVVRKEAENCDCLQGFQVCHSLGG 321
>01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349
Length = 447
Score = 144 bits (349), Expect = 4e-35
Identities = 68/146 (46%), Positives = 92/146 (63%), Gaps = 3/146 (2%)
Frame = +2
Query: 77 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGD---DSFNTFFSETG 247
MRE + + GQ G QIG+ WE+ C EHGI P G+ +G D + N +++E
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTGRY-----VGTSDLQLERVNVYYNEAS 55
Query: 248 AGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDL 427
G+ VPRAV +DLEP +D VRTG Y Q+F P+ + G+ A NN+A+GHYT G E++D
Sbjct: 56 CGRFVPRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDS 115
Query: 428 VLDRIRKLADQCTGLQGFLIFHSFGG 505
VLD +RK A+ C LQGF + HS GG
Sbjct: 116 VLDVVRKEAENCDCLQGFQVCHSLGG 141
>06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379
Length = 446
Score = 142 bits (343), Expect = 2e-34
Identities = 65/143 (45%), Positives = 90/143 (62%)
Frame = +2
Query: 77 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 256
MRE + + GQ G QIG WE+ C EHGI G+ D + + N +++E G+
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSDLQL--ERINVYYNEASGGR 58
Query: 257 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 436
+VPRAV +DLEP +D VR+G Y Q+F P+ + G+ A NN+A+GHYT G E++D VLD
Sbjct: 59 YVPRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLD 118
Query: 437 RIRKLADQCTGLQGFLIFHSFGG 505
+RK A+ C LQGF + HS GG
Sbjct: 119 VVRKEAENCDCLQGFQVCHSLGG 141
>03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998
Length = 444
Score = 140 bits (339), Expect = 6e-34
Identities = 63/143 (44%), Positives = 90/143 (62%)
Frame = +2
Query: 77 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 256
MRE + + GQ G QIG WE+ C EHG+ G+ D + + N +++E G+
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGVDATGRYAGDSDLQL--ERINVYYNEASGGR 58
Query: 257 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 436
+VPRAV +DLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E++D VLD
Sbjct: 59 YVPRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLD 118
Query: 437 RIRKLADQCTGLQGFLIFHSFGG 505
+RK A+ C LQGF + HS GG
Sbjct: 119 VVRKEAENCDCLQGFQVCHSLGG 141
>03_01_0034 + 318432-318825,318902-319851
Length = 447
Score = 140 bits (339), Expect = 6e-34
Identities = 64/143 (44%), Positives = 88/143 (61%)
Frame = +2
Query: 77 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 256
MRE + + GQ G QIG WE+ C EHGI G+ D + + N +++E G+
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDATGRYDGDSDLQL--ERVNVYYNEASCGR 58
Query: 257 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 436
VPRAV +DLEP +D VR+G Y +F P+ + G+ A NN+A+GHYT G E++D VLD
Sbjct: 59 FVPRAVLMDLEPGTMDSVRSGPYGHIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLD 118
Query: 437 RIRKLADQCTGLQGFLIFHSFGG 505
+RK A+ C LQGF + HS GG
Sbjct: 119 VVRKEAENCDCLQGFQVCHSLGG 141
>02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467
Length = 447
Score = 139 bits (336), Expect = 1e-33
Identities = 64/143 (44%), Positives = 89/143 (62%)
Frame = +2
Query: 77 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 256
MRE + + GQ G QIG WE+ C EHGI G+ D + + N +++E G+
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSDLQL--ERINVYYNEASGGR 58
Query: 257 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 436
VPRAV +DLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E++D VLD
Sbjct: 59 FVPRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLD 118
Query: 437 RIRKLADQCTGLQGFLIFHSFGG 505
+RK A+ C LQGF + HS GG
Sbjct: 119 VVRKEAENCDCLQGFQVCHSLGG 141
>01_06_1060 +
34162161-34162554,34162613-34162675,34163262-34163531,
34163944-34164623
Length = 468
Score = 132 bits (318), Expect = 2e-31
Identities = 61/134 (45%), Positives = 84/134 (62%)
Frame = +2
Query: 77 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 256
MRE + + GQ G QIG WE+ C EHGI P G+ + + + N +++E G+
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCDEHGIDPTGRYTGNSDLQL--ERVNVYYNEASCGR 58
Query: 257 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 436
VPRAV +DLEP +D VRTG Y Q+F P+ + G+ A NN+A+GHYT G E++D VLD
Sbjct: 59 FVPRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLD 118
Query: 437 RIRKLADQCTGLQG 478
+RK A+ C LQG
Sbjct: 119 VVRKEAENCDCLQG 132
>03_05_0575 +
25747813-25748206,25748567-25748614,25750296-25750565,
25750658-25751334
Length = 462
Score = 124 bits (300), Expect = 3e-29
Identities = 59/142 (41%), Positives = 82/142 (57%)
Frame = +2
Query: 77 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 256
MRE + + GQ G QIG WE+ C EHG+ P G T + N +F+E G+
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICGEHGVDPTGTYTG--TSPQQLERINVYFNEASGGR 58
Query: 257 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 436
HVPRAV +DLEP +D +R+G +F P+ + G+ A NN+A+GHYT G E++D VLD
Sbjct: 59 HVPRAVLMDLEPGTMDSLRSGPIGGIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLD 118
Query: 437 RIRKLADQCTGLQGFLIFHSFG 502
+RK A+ C LQ + G
Sbjct: 119 VVRKEAENCDCLQDNRVIRQLG 140
>05_01_0412 -
3248405-3248458,3248533-3248637,3248950-3249078,
3249279-3249353,3249520-3249624,3249714-3249767,
3249970-3250370,3250583-3250694,3250886-3251086,
3251844-3251972
Length = 454
Score = 109 bits (262), Expect = 1e-24
Identities = 56/144 (38%), Positives = 85/144 (59%), Gaps = 2/144 (1%)
Frame = +2
Query: 80 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKH 259
RE I++ VGQ G QIG W+ CLEHGI DG + T GG D + FF + +
Sbjct: 3 REIITIQVGQCGNQIGMEFWKQLCLEHGIGKDGLLEDFATQGG--DRKDVFFYQADDQHY 60
Query: 260 VPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKE--DAANNYARGHYTIGKEIVDLVL 433
+PRA+ VDLEP V++ ++ YR L++ E + + A NN+A G++ G+++VD ++
Sbjct: 61 IPRALLVDLEPRVINGIQNSEYRNLYNHENIFVAEHGGGAGNNWASGYHQ-GEQVVDDIM 119
Query: 434 DRIRKLADQCTGLQGFLIFHSFGG 505
D I + AD L+GF++ HS G
Sbjct: 120 DMIDREADGSDSLEGFVLCHSIAG 143
>04_01_0383 +
5085697-5085724,5085816-5085927,5087249-5087285,
5087512-5087581,5087704-5087808,5088022-5088172,
5088257-5088339,5089152-5089372,5089465-5089501,
5089668-5089753
Length = 309
Score = 30.7 bits (66), Expect = 0.69
Identities = 13/22 (59%), Positives = 15/22 (68%)
Frame = -2
Query: 216 SSPPPMVLSVGIWPSGWMPCSR 151
S P P+ LS I SGW+PCSR
Sbjct: 147 SMPYPITLSAVISLSGWLPCSR 168
>01_01_0524 -
3845637-3845727,3845803-3845896,3846415-3846497,
3846587-3846737,3847113-3847217,3847351-3847420,
3847551-3847587,3848155-3848257,3848441-3848480
Length = 257
Score = 30.3 bits (65), Expect = 0.92
Identities = 11/21 (52%), Positives = 16/21 (76%)
Frame = -2
Query: 213 SPPPMVLSVGIWPSGWMPCSR 151
+P P+ LSV + SGW+PC+R
Sbjct: 149 NPYPVNLSVSVGLSGWLPCAR 169
>05_07_0299 -
29073900-29073984,29074125-29074158,29074269-29074351,
29074457-29074607,29074853-29074957,29075099-29075168,
29075374-29075410,29076732-29076843,29076956-29076983
Length = 234
Score = 29.5 bits (63), Expect = 1.6
Identities = 12/20 (60%), Positives = 14/20 (70%)
Frame = -2
Query: 210 PPPMVLSVGIWPSGWMPCSR 151
P P+ LS I SGW+PCSR
Sbjct: 149 PYPITLSAVISLSGWLPCSR 168
>10_03_0016 -
7099862-7099967,7100059-7100357,7101862-7102171,
7104402-7105054,7105266-7105554,7106549-7106634
Length = 580
Score = 29.1 bits (62), Expect = 2.1
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = +1
Query: 334 VSSRTTYYW*GRCGQQLCPWSLHHWK 411
VS+RTTY +C Q CPW +H +K
Sbjct: 239 VSNRTTYKV--KCTQAGCPWRVHGYK 262
>08_01_0312 + 2764744-2767390,2767632-2767990
Length = 1001
Score = 29.1 bits (62), Expect = 2.1
Identities = 13/24 (54%), Positives = 17/24 (70%)
Frame = +3
Query: 177 ARCPQTRPSGVETILSTLSSARPE 248
+RCPQ RPS + +LS L ARP+
Sbjct: 969 SRCPQERPS-MREVLSMLQEARPK 991
>12_02_0399 - 18600444-18600591,18600626-18601656
Length = 392
Score = 28.3 bits (60), Expect = 3.7
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +1
Query: 334 VSSRTTYYW*GRCGQQLCPWSLHHWK 411
+S+RTTY +C Q CPW +H +K
Sbjct: 240 ISNRTTYDV--KCTQAGCPWRVHGYK 263
>07_03_0483 - 18605176-18606118,18606353-18606482,18606609-18606738
Length = 400
Score = 28.3 bits (60), Expect = 3.7
Identities = 8/15 (53%), Positives = 12/15 (80%)
Frame = -3
Query: 407 QWCSDHGHSCWPHLP 363
++ S+HGHSCW +P
Sbjct: 26 RYISEHGHSCWSSVP 40
>03_05_0246 + 22333172-22333417
Length = 81
Score = 28.3 bits (60), Expect = 3.7
Identities = 16/60 (26%), Positives = 27/60 (45%)
Frame = -1
Query: 367 FLTSNKLFWMKQLSVCASADLINNSRFKIDEDSTGYVLASSGLAEESVERIVSTPDGLVC 188
FL S LF++ L + L N S FKI + +T +V E++ ++ +C
Sbjct: 13 FLFSVSLFYIPDLMIDWIDPLTNKSTFKIKDTTTSFVEEKKNELEKAKSKLNVISSNKIC 72
>02_05_1147 -
34447519-34448042,34448126-34449092,34449458-34449657,
34449867-34450051,34450130-34450228,34450316-34450357,
34450516-34450860,34450956-34451101,34451213-34451296,
34451424-34451502,34451596-34451675,34451824-34451875,
34451992-34452026
Length = 945
Score = 28.3 bits (60), Expect = 3.7
Identities = 16/43 (37%), Positives = 22/43 (51%)
Frame = +3
Query: 120 RSVMPAGSFTAWSTASSLMARCPQTRPSGVETILSTLSSARPE 248
++ M A T+ S +S P + PSGV L + SSA PE
Sbjct: 690 QTAMAASQATSISRGASQPLAVPNSMPSGVNFPLQSSSSAPPE 732
>01_05_0685 +
24273331-24273569,24275429-24275465,24275739-24275808,
24275978-24276082,24276205-24276355,24276454-24276536,
24276619-24276712,24276796-24276883
Length = 288
Score = 28.3 bits (60), Expect = 3.7
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = -2
Query: 204 PMVLSVGIWPSGWMPCSR 151
P+ LS I SGW+PCSR
Sbjct: 184 PVTLSAVIGLSGWLPCSR 201
>10_08_0253 -
16196275-16196307,16196425-16196550,16196643-16196741,
16196822-16197001,16197090-16197371,16197471-16199141,
16199257-16199463,16199566-16199700,16199792-16200082,
16200403-16200621,16200876-16201034,16201120-16201181,
16201257-16201383,16201460-16201693,16201777-16202003,
16202163-16202257,16202341-16202468,16202574-16202594,
16202765-16202921,16203007-16203075,16203228-16203341,
16203415-16203491,16203576-16203688,16204432-16204507,
16204592-16204756,16204825-16204952,16205049-16205130,
16205426-16205548,16205633-16205860,16205933-16206034,
16206144-16206341,16206581-16206760,16206868-16207020,
16207690-16207797,16208201-16208355,16208786-16208912,
16209825-16209914,16209986-16210127,16210303-16210379,
16210467-16210582,16210638-16210773,16211130-16211198,
16211279-16211361,16211655-16211720,16211788-16211974,
16212054-16213547,16213635-16214165,16214234-16214363,
16214407-16215878,16216359-16216364,16216750-16217055,
16217364-16217468,16217577-16217772,16217862-16217929,
16218853-16220631,16221026-16221151,16221604-16221780,
16221997-16222128,16223461-16223498,16223710-16223788,
16224175-16224284,16224787-16224935,16225027-16225197,
16225281-16225552,16226355-16226442,16227942-16228369
Length = 5157
Score = 27.5 bits (58), Expect = 6.5
Identities = 15/37 (40%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Frame = +3
Query: 138 GSFTAWSTASSLMARCPQTRPS-GVETILSTLSSARP 245
GSF+A + A+ L+ARCP R V + ST P
Sbjct: 5 GSFSAAAAAARLLARCPALRADPRVLALASTAGGGGP 41
>06_01_0631 -
4605111-4605482,4605571-4605903,4605940-4605977,
4606208-4606520,4606622-4607967,4608265-4608334,
4608478-4608555
Length = 849
Score = 27.5 bits (58), Expect = 6.5
Identities = 23/80 (28%), Positives = 38/80 (47%)
Frame = -1
Query: 268 TGYVLASSGLAEESVERIVSTPDGLVCGHLAIRLDAVLQAVKLPAGITDLDSGLANVYRD 89
T + A S L ++I S +V + A L ++L A +L +TDL LAN D
Sbjct: 589 TAFYFAFSTLTFSHGQKIQSIQSKIVVSYTA-SLSSMLTAERLQPSVTDLKQLLAN--GD 645
Query: 88 ALTHFDLSFFLCLNVELNYN 29
++ H SF + +L ++
Sbjct: 646 SVGHQSGSFVQSILKKLKFD 665
>05_01_0162 -
1095020-1095202,1096114-1096188,1096939-1097039,
1097467-1097577,1097704-1097807,1098260-1098493,
1098583-1099304
Length = 509
Score = 27.5 bits (58), Expect = 6.5
Identities = 11/32 (34%), Positives = 16/32 (50%)
Frame = +2
Query: 173 DGQMPTDKTIGGGDDSFNTFFSETGAGKHVPR 268
DG++PTD G D N S+ A + P+
Sbjct: 343 DGELPTDAAAQGADVDLNLRISQPAASQQSPK 374
>08_01_0935 - 9218271-9219860,9219959-9220232,9220506-9221767
Length = 1041
Score = 27.1 bits (57), Expect = 8.6
Identities = 10/27 (37%), Positives = 19/27 (70%)
Frame = -1
Query: 301 NNSRFKIDEDSTGYVLASSGLAEESVE 221
++S F+IDED+ +++ S L +E +E
Sbjct: 957 SSSSFRIDEDAVDWMVGSVWLTDEKIE 983
>07_03_0686 + 20697493-20697927
Length = 144
Score = 27.1 bits (57), Expect = 8.6
Identities = 16/53 (30%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Frame = +2
Query: 263 PRAVFVDLEPTVV-DEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEI 418
P+ F LEP+V+ DE T + + E L++GKE+ + + +G+E+
Sbjct: 5 PKDDFDFLEPSVLLDETHYQTGFKNGYSEGLVSGKEEGRQVGLKNGFQVGEEL 57
>07_01_0284 - 2082249-2082256,2082496-2083009
Length = 173
Score = 27.1 bits (57), Expect = 8.6
Identities = 13/43 (30%), Positives = 20/43 (46%)
Frame = -2
Query: 249 APVSLKKVLKESSPPPMVLSVGIWPSGWMPCSRQ*SSQQALPI 121
+P+ K E PPP + I W P + ++QQ +PI
Sbjct: 63 SPIFAKLAAAEPPPPPSTTAPIIAAPAWAPLLQFAATQQIIPI 105
>04_04_1189 +
31586991-31587291,31587358-31587397,31587449-31587534,
31587535-31588097,31588250-31589913,31589956-31590066,
31590152-31591181,31591234-31591406,31591535-31591814,
31592275-31592331
Length = 1434
Score = 27.1 bits (57), Expect = 8.6
Identities = 11/30 (36%), Positives = 18/30 (60%), Gaps = 2/30 (6%)
Frame = -1
Query: 100 VYRDA--LTHFDLSFFLCLNVELNYNQSSF 17
VYRD + HFDL ++C++ N + S +
Sbjct: 306 VYRDQRIIDHFDLQIWICVSTNFNEDSSGW 335
>02_05_0220 - 26885502-26885561,26885940-26886739,26887055-26887421,
26887942-26888055,26888132-26888228,26889115-26889235,
26889306-26889390,26889494-26889643,26889871-26889987,
26890123-26890221,26890439-26890495,26890581-26890664,
26890759-26890828,26891015-26891169,26891557-26892095,
26892327-26892393,26892436-26892984,26893574-26893768,
26894485-26894569,26895822-26896441,26897154-26897486,
26897552-26897616,26897868-26897955,26898250-26898331,
26898720-26898796,26899152-26899256,26899496-26899630,
26900199-26900888,26901474-26902261,26902990-26904673
Length = 2825
Score = 27.1 bits (57), Expect = 8.6
Identities = 21/67 (31%), Positives = 24/67 (35%)
Frame = +2
Query: 86 CISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVP 265
CI + V IG C C G DK GDD +ET HVP
Sbjct: 2740 CIEISVDGKFALIGT-CLSNSCNRDGFSAIDDYELDKP--NGDDDLPEL-NETKPSVHVP 2795
Query: 266 RAVFVDL 286
F+DL
Sbjct: 2796 SVCFIDL 2802
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,347,537
Number of Sequences: 37544
Number of extensions: 355334
Number of successful extensions: 1238
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 1192
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1228
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1071221400
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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