Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--2290
         (507 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    24   0.90 
X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Triboliu...    22   3.6  
U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II p...    22   3.6  
U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I pr...    22   3.6  
AF264718-1|AAF75271.1|  125|Tribolium castaneum putative cytochr...    21   4.8  
AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory recept...    21   6.3  
AF264720-1|AAF75272.1|  126|Tribolium castaneum putative cytochr...    21   6.3  

>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 23.8 bits (49), Expect = 0.90
 Identities = 16/58 (27%), Positives = 27/58 (46%), Gaps = 2/58 (3%)
 Frame = -3

Query: 313 RTATRPSLQQNFVINTAARQ--RLLTTLREHYQRSGVTPTFSNNIFHDAVAHREAPRH 146
           +TA   +      +  AA+Q  RL+ T    + R+ V+P  S++     V   +AP H
Sbjct: 141 QTAAMAAYLNAAAVAAAAQQSHRLMMTSPSGFNRASVSPLISSSSSPPGVFPVDAPMH 198



 Score = 20.6 bits (41), Expect = 8.4
 Identities = 6/12 (50%), Positives = 8/12 (66%)
 Frame = -3

Query: 349 GNSAGEHHAVWK 314
           GNSA   H+ W+
Sbjct: 352 GNSASNRHSAWQ 363


>X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Tribolium
           castaneum mRNAfor alhpa amylase 3'region. ).
          Length = 489

 Score = 21.8 bits (44), Expect = 3.6
 Identities = 6/15 (40%), Positives = 11/15 (73%)
 Frame = +2

Query: 365 DDRWLQLFSLFGYTN 409
           + RW Q+F++ G+ N
Sbjct: 379 EHRWRQIFNMVGFRN 393


>U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II
           protein.
          Length = 490

 Score = 21.8 bits (44), Expect = 3.6
 Identities = 6/15 (40%), Positives = 11/15 (73%)
 Frame = +2

Query: 365 DDRWLQLFSLFGYTN 409
           + RW Q+F++ G+ N
Sbjct: 380 EHRWRQIFNMVGFRN 394


>U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I
           protein.
          Length = 490

 Score = 21.8 bits (44), Expect = 3.6
 Identities = 6/15 (40%), Positives = 11/15 (73%)
 Frame = +2

Query: 365 DDRWLQLFSLFGYTN 409
           + RW Q+F++ G+ N
Sbjct: 380 EHRWRQIFNMVGFRN 394


>AF264718-1|AAF75271.1|  125|Tribolium castaneum putative cytochrome
           P450 monooxigenaseCYP4Q6 protein.
          Length = 125

 Score = 21.4 bits (43), Expect = 4.8
 Identities = 9/30 (30%), Positives = 18/30 (60%)
 Frame = -3

Query: 433 DVETSKICVRVTKQTEQL*PAIVFVSVFGN 344
           D++  K   R  K+T +L P++ F+S + +
Sbjct: 40  DLQELKYTKRCIKETLRLFPSVPFISRYAS 69


>AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory receptor
           candidate 41 protein.
          Length = 398

 Score = 21.0 bits (42), Expect = 6.3
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = +3

Query: 378 YSCSVCLVTRTQILEVSTSR*WSYHSN 458
           Y CS  ++ R +I  ++TS   S H N
Sbjct: 179 YICSYTVLIRNKISNLNTSLIHSTHLN 205


>AF264720-1|AAF75272.1|  126|Tribolium castaneum putative cytochrome
           P450 monooxigenaseCYP4Q1 protein.
          Length = 126

 Score = 21.0 bits (42), Expect = 6.3
 Identities = 9/26 (34%), Positives = 16/26 (61%)
 Frame = -3

Query: 433 DVETSKICVRVTKQTEQL*PAIVFVS 356
           D++  K   R  K+T +L P++ F+S
Sbjct: 41  DLQNLKYLERCIKETLRLYPSVHFIS 66


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 113,667
Number of Sequences: 336
Number of extensions: 2207
Number of successful extensions: 8
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12049355
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)