Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--2290
         (507 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY118739-1|AAM50599.1|  351|Drosophila melanogaster GH04973p pro...    45   7e-05
AE014134-3109|AAF53808.1|  351|Drosophila melanogaster CG10194-P...    45   7e-05
AY069462-1|AAL39607.1|  343|Drosophila melanogaster LD18882p pro...    30   2.1  
AE014298-1243|AAF46420.1|  343|Drosophila melanogaster CG10648-P...    30   2.1  
AY061071-1|AAL28619.1|  250|Drosophila melanogaster LD04103p pro...    29   4.8  
AF202990-1|AAG35633.1|  254|Drosophila melanogaster STATHMIN-19 ...    29   4.8  
AE014134-1054|AAF52345.2|  250|Drosophila melanogaster CG31641-P...    29   4.8  
AE014134-1053|AAN10581.1|  302|Drosophila melanogaster CG31641-P...    29   4.8  
BT001751-1|AAN71506.1|  257|Drosophila melanogaster RH02809p pro...    28   6.3  
AF202989-1|AAG35632.1|  174|Drosophila melanogaster STATHMIN-13 ...    28   6.3  
AF202774-1|AAG35628.1|  257|Drosophila melanogaster stathmin-14 ...    28   6.3  
AF202773-1|AAG35627.1|  234|Drosophila melanogaster stathmin-1 p...    28   6.3  
AE014134-1052|AAN10580.1|  257|Drosophila melanogaster CG31641-P...    28   6.3  

>AY118739-1|AAM50599.1|  351|Drosophila melanogaster GH04973p
           protein.
          Length = 351

 Score = 44.8 bits (101), Expect = 7e-05
 Identities = 25/75 (33%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
 Frame = +2

Query: 206 RDAATLIVLTKRSKQSLSRGGVNYEILLQTRTGRGAF-PNSVVFPGGVTEDADEDDRWLQ 382
           R +++LI+L K   +  +    +Y  LL TRT +  F P S VFPGGV + +D    WL+
Sbjct: 9   RSSSSLILLAKNQVEKST--SCDYNALLLTRTQKSTFMPESSVFPGGVCDASDSSPAWLE 66

Query: 383 LFSLFGYTNTDFRSL 427
            F    ++    R++
Sbjct: 67  HFQRNEFSAAKLRNV 81


>AE014134-3109|AAF53808.1|  351|Drosophila melanogaster CG10194-PA
           protein.
          Length = 351

 Score = 44.8 bits (101), Expect = 7e-05
 Identities = 25/75 (33%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
 Frame = +2

Query: 206 RDAATLIVLTKRSKQSLSRGGVNYEILLQTRTGRGAF-PNSVVFPGGVTEDADEDDRWLQ 382
           R +++LI+L K   +  +    +Y  LL TRT +  F P S VFPGGV + +D    WL+
Sbjct: 9   RSSSSLILLAKNQVEKST--SCDYNALLLTRTQKSTFMPESSVFPGGVCDASDSSPAWLE 66

Query: 383 LFSLFGYTNTDFRSL 427
            F    ++    R++
Sbjct: 67  HFQRNEFSAAKLRNV 81


>AY069462-1|AAL39607.1|  343|Drosophila melanogaster LD18882p
           protein.
          Length = 343

 Score = 29.9 bits (64), Expect = 2.1
 Identities = 15/43 (34%), Positives = 24/43 (55%)
 Frame = -3

Query: 172 VAHREAPRHRRVIIRYAKVNLHVYRLTLIRLDKNTYCFIYNES 44
           +  REA R  + ++  AK++ H+ +  + RL   TY  IYN S
Sbjct: 140 IERREARREEKALVA-AKIDNHIEKALMDRLKNGTYRDIYNFS 181


>AE014298-1243|AAF46420.1|  343|Drosophila melanogaster CG10648-PA
           protein.
          Length = 343

 Score = 29.9 bits (64), Expect = 2.1
 Identities = 15/43 (34%), Positives = 24/43 (55%)
 Frame = -3

Query: 172 VAHREAPRHRRVIIRYAKVNLHVYRLTLIRLDKNTYCFIYNES 44
           +  REA R  + ++  AK++ H+ +  + RL   TY  IYN S
Sbjct: 140 IERREARREEKALVA-AKIDNHIEKALMDRLKNGTYRDIYNFS 181


>AY061071-1|AAL28619.1|  250|Drosophila melanogaster LD04103p
           protein.
          Length = 250

 Score = 28.7 bits (61), Expect = 4.8
 Identities = 14/38 (36%), Positives = 20/38 (52%)
 Frame = +2

Query: 227 VLTKRSKQSLSRGGVNYEILLQTRTGRGAFPNSVVFPG 340
           + T+   Q  SRGG++YE++L       A P   V PG
Sbjct: 54  ITTEIRCQEKSRGGLSYEVILAEPAPNVAVPKRPVTPG 91


>AF202990-1|AAG35633.1|  254|Drosophila melanogaster STATHMIN-19
           protein.
          Length = 254

 Score = 28.7 bits (61), Expect = 4.8
 Identities = 14/38 (36%), Positives = 20/38 (52%)
 Frame = +2

Query: 227 VLTKRSKQSLSRGGVNYEILLQTRTGRGAFPNSVVFPG 340
           + T+   Q  SRGG++YE++L       A P   V PG
Sbjct: 6   ITTEIRCQEKSRGGLSYEVILAEPAPNVAVPKRPVTPG 43


>AE014134-1054|AAF52345.2|  250|Drosophila melanogaster CG31641-PA,
           isoform A protein.
          Length = 250

 Score = 28.7 bits (61), Expect = 4.8
 Identities = 14/38 (36%), Positives = 20/38 (52%)
 Frame = +2

Query: 227 VLTKRSKQSLSRGGVNYEILLQTRTGRGAFPNSVVFPG 340
           + T+   Q  SRGG++YE++L       A P   V PG
Sbjct: 54  ITTEIRCQEKSRGGLSYEVILAEPAPNVAVPKRPVTPG 91


>AE014134-1053|AAN10581.1|  302|Drosophila melanogaster CG31641-PB,
           isoform B protein.
          Length = 302

 Score = 28.7 bits (61), Expect = 4.8
 Identities = 14/38 (36%), Positives = 20/38 (52%)
 Frame = +2

Query: 227 VLTKRSKQSLSRGGVNYEILLQTRTGRGAFPNSVVFPG 340
           + T+   Q  SRGG++YE++L       A P   V PG
Sbjct: 54  ITTEIRCQEKSRGGLSYEVILAEPAPNVAVPKRPVTPG 91


>BT001751-1|AAN71506.1|  257|Drosophila melanogaster RH02809p
           protein.
          Length = 257

 Score = 28.3 bits (60), Expect = 6.3
 Identities = 13/31 (41%), Positives = 17/31 (54%)
 Frame = +2

Query: 248 QSLSRGGVNYEILLQTRTGRGAFPNSVVFPG 340
           Q  SRGG++YE++L       A P   V PG
Sbjct: 16  QEKSRGGLSYEVILAEPAPNVAVPKRPVTPG 46


>AF202989-1|AAG35632.1|  174|Drosophila melanogaster STATHMIN-13
           protein.
          Length = 174

 Score = 28.3 bits (60), Expect = 6.3
 Identities = 13/31 (41%), Positives = 17/31 (54%)
 Frame = +2

Query: 248 QSLSRGGVNYEILLQTRTGRGAFPNSVVFPG 340
           Q  SRGG++YE++L       A P   V PG
Sbjct: 16  QEKSRGGLSYEVILAEPAPNVAVPKRPVTPG 46


>AF202774-1|AAG35628.1|  257|Drosophila melanogaster stathmin-14
           protein.
          Length = 257

 Score = 28.3 bits (60), Expect = 6.3
 Identities = 13/31 (41%), Positives = 17/31 (54%)
 Frame = +2

Query: 248 QSLSRGGVNYEILLQTRTGRGAFPNSVVFPG 340
           Q  SRGG++YE++L       A P   V PG
Sbjct: 16  QEKSRGGLSYEVILAEPAPNVAVPKRPVTPG 46


>AF202773-1|AAG35627.1|  234|Drosophila melanogaster stathmin-1
           protein.
          Length = 234

 Score = 28.3 bits (60), Expect = 6.3
 Identities = 13/31 (41%), Positives = 17/31 (54%)
 Frame = +2

Query: 248 QSLSRGGVNYEILLQTRTGRGAFPNSVVFPG 340
           Q  SRGG++YE++L       A P   V PG
Sbjct: 16  QEKSRGGLSYEVILAEPAPNVAVPKRPVTPG 46


>AE014134-1052|AAN10580.1|  257|Drosophila melanogaster CG31641-PC,
           isoform C protein.
          Length = 257

 Score = 28.3 bits (60), Expect = 6.3
 Identities = 13/31 (41%), Positives = 17/31 (54%)
 Frame = +2

Query: 248 QSLSRGGVNYEILLQTRTGRGAFPNSVVFPG 340
           Q  SRGG++YE++L       A P   V PG
Sbjct: 16  QEKSRGGLSYEVILAEPAPNVAVPKRPVTPG 46


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,412,667
Number of Sequences: 53049
Number of extensions: 411262
Number of successful extensions: 990
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 976
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 990
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1825511424
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)