Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--2288
         (535 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A0BFK0 Cluster: Chromosome undetermined scaffold_104, w...    33   4.1  
UniRef50_Q7Q1F5 Cluster: ENSANGP00000015746; n=3; Culicidae|Rep:...    33   5.4  
UniRef50_Q23BR5 Cluster: Protein kinase domain containing protei...    32   7.2  
UniRef50_A4XP93 Cluster: Transcriptional regulator of molybdate ...    32   9.5  

>UniRef50_A0BFK0 Cluster: Chromosome undetermined scaffold_104,
           whole genome shotgun sequence; n=2; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_104,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 971

 Score = 33.1 bits (72), Expect = 4.1
 Identities = 15/36 (41%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
 Frame = -3

Query: 467 YFITFLGYELHHVWHLFGKSDV-MYGDTKFLILSDG 363
           YFI F+ +     WHL GK +V +YGDT   ++  G
Sbjct: 348 YFIIFVAHMCSCAWHLLGKIEVDVYGDTNSWLIHYG 383


>UniRef50_Q7Q1F5 Cluster: ENSANGP00000015746; n=3; Culicidae|Rep:
           ENSANGP00000015746 - Anopheles gambiae str. PEST
          Length = 516

 Score = 32.7 bits (71), Expect = 5.4
 Identities = 18/34 (52%), Positives = 22/34 (64%)
 Frame = -3

Query: 464 FITFLGYELHHVWHLFGKSDVMYGDTKFLILSDG 363
           F   LGYE   VW +FG S V+ GDT F++L DG
Sbjct: 273 FYLQLGYE---VWLIFGNS-VLMGDTTFVLLLDG 302


>UniRef50_Q23BR5 Cluster: Protein kinase domain containing protein;
           n=1; Tetrahymena thermophila SB210|Rep: Protein kinase
           domain containing protein - Tetrahymena thermophila
           SB210
          Length = 1233

 Score = 32.3 bits (70), Expect = 7.2
 Identities = 18/58 (31%), Positives = 34/58 (58%)
 Frame = -2

Query: 246 VEKLIQNVLKLTLNS*GYECIKIKEAFFENVKYFLEKIVSHVQFCLQVFYQLKKHRFI 73
           +EK+I   + L   S  Y+C+K+ + FF+++KY  +   +  +F L+ FYQ K  + +
Sbjct: 784 IEKIINENMVLENASDRYDCLKLHQLFFDSIKYLDD---NANKFFLE-FYQKKIFKLV 837


>UniRef50_A4XP93 Cluster: Transcriptional regulator of molybdate
           metabolism, LysR family; n=1; Pseudomonas mendocina
           ymp|Rep: Transcriptional regulator of molybdate
           metabolism, LysR family - Pseudomonas mendocina ymp
          Length = 362

 Score = 31.9 bits (69), Expect = 9.5
 Identities = 14/37 (37%), Positives = 19/37 (51%)
 Frame = -3

Query: 452 LGYELHHVWHLFGKSDVMYGDTKFLILSDGSGNRAAP 342
           +GY   H W+L GK    +G +  + L  G G R AP
Sbjct: 44  VGYSYRHAWNLLGKWQAFFG-SPLIELERGKGARLAP 79


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 478,207,916
Number of Sequences: 1657284
Number of extensions: 9178041
Number of successful extensions: 17883
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 17449
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17880
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 33739557507
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)