Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--2288
         (535 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D21203-1|BAA04745.2| 1408|Drosophila melanogaster large Forked p...    33   0.24 
D17528-1|BAA04479.1|  604|Drosophila melanogaster small forked p...    31   1.3  
AE014298-2554|AAF48719.1|  608|Drosophila melanogaster CG5424-PA...    31   1.3  
AE014298-2553|AAO41690.1| 1509|Drosophila melanogaster CG5424-PC...    31   1.3  
AE014298-2552|AAO41689.1| 1436|Drosophila melanogaster CG5424-PD...    31   1.3  
AE014298-2551|AAF48718.2| 1436|Drosophila melanogaster CG5424-PB...    31   1.3  
AE014298-2550|ABI30989.1| 1918|Drosophila melanogaster CG5424-PF...    31   1.3  

>D21203-1|BAA04745.2| 1408|Drosophila melanogaster large Forked
            protein protein.
          Length = 1408

 Score = 33.1 bits (72), Expect = 0.24
 Identities = 18/48 (37%), Positives = 25/48 (52%)
 Frame = +1

Query: 280  ENQYSTMLKRLMIYQKQLHLNGAARFPEPSLRIKNLVSPYITSLFPNK 423
            E+ Y    ++  IY  + HL G  R   P+L  K LV P++   FPNK
Sbjct: 931  EDHYELTQQQQQIYG-ETHLAGGQRTGGPNLVNKQLVLPFVPPSFPNK 977


>D17528-1|BAA04479.1|  604|Drosophila melanogaster small forked
           protein protein.
          Length = 604

 Score = 30.7 bits (66), Expect = 1.3
 Identities = 17/48 (35%), Positives = 24/48 (50%)
 Frame = +1

Query: 280 ENQYSTMLKRLMIYQKQLHLNGAARFPEPSLRIKNLVSPYITSLFPNK 423
           E+ Y    ++  IY  + HL    R   P+L  K LV P++   FPNK
Sbjct: 130 EDHYELTQQQQQIYG-ETHLPSGQRTGGPNLVNKQLVLPFVPPSFPNK 176


>AE014298-2554|AAF48719.1|  608|Drosophila melanogaster CG5424-PA,
           isoform A protein.
          Length = 608

 Score = 30.7 bits (66), Expect = 1.3
 Identities = 17/48 (35%), Positives = 24/48 (50%)
 Frame = +1

Query: 280 ENQYSTMLKRLMIYQKQLHLNGAARFPEPSLRIKNLVSPYITSLFPNK 423
           E+ Y    ++  IY  + HL    R   P+L  K LV P++   FPNK
Sbjct: 130 EDHYELTQQQQQIYG-ETHLPSGQRTGGPNLVNKQLVLPFVPPSFPNK 176


>AE014298-2553|AAO41690.1| 1509|Drosophila melanogaster CG5424-PC,
            isoform C protein.
          Length = 1509

 Score = 30.7 bits (66), Expect = 1.3
 Identities = 17/48 (35%), Positives = 24/48 (50%)
 Frame = +1

Query: 280  ENQYSTMLKRLMIYQKQLHLNGAARFPEPSLRIKNLVSPYITSLFPNK 423
            E+ Y    ++  IY  + HL    R   P+L  K LV P++   FPNK
Sbjct: 1031 EDHYELTQQQQQIYG-ETHLPSGQRTGGPNLVNKQLVLPFVPPSFPNK 1077


>AE014298-2552|AAO41689.1| 1436|Drosophila melanogaster CG5424-PD,
            isoform D protein.
          Length = 1436

 Score = 30.7 bits (66), Expect = 1.3
 Identities = 17/48 (35%), Positives = 24/48 (50%)
 Frame = +1

Query: 280  ENQYSTMLKRLMIYQKQLHLNGAARFPEPSLRIKNLVSPYITSLFPNK 423
            E+ Y    ++  IY  + HL    R   P+L  K LV P++   FPNK
Sbjct: 958  EDHYELTQQQQQIYG-ETHLPSGQRTGGPNLVNKQLVLPFVPPSFPNK 1004


>AE014298-2551|AAF48718.2| 1436|Drosophila melanogaster CG5424-PB,
            isoform B protein.
          Length = 1436

 Score = 30.7 bits (66), Expect = 1.3
 Identities = 17/48 (35%), Positives = 24/48 (50%)
 Frame = +1

Query: 280  ENQYSTMLKRLMIYQKQLHLNGAARFPEPSLRIKNLVSPYITSLFPNK 423
            E+ Y    ++  IY  + HL    R   P+L  K LV P++   FPNK
Sbjct: 958  EDHYELTQQQQQIYG-ETHLPSGQRTGGPNLVNKQLVLPFVPPSFPNK 1004


>AE014298-2550|ABI30989.1| 1918|Drosophila melanogaster CG5424-PF,
            isoform F protein.
          Length = 1918

 Score = 30.7 bits (66), Expect = 1.3
 Identities = 17/48 (35%), Positives = 24/48 (50%)
 Frame = +1

Query: 280  ENQYSTMLKRLMIYQKQLHLNGAARFPEPSLRIKNLVSPYITSLFPNK 423
            E+ Y    ++  IY  + HL    R   P+L  K LV P++   FPNK
Sbjct: 1444 EDHYELTQQQQQIYG-ETHLPSGQRTGGPNLVNKQLVLPFVPPSFPNK 1490


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,752,968
Number of Sequences: 53049
Number of extensions: 440447
Number of successful extensions: 855
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 840
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 855
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 2012211456
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)