Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--2285
         (546 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_02_0090 + 6507378-6507481,6507495-6507627,6507658-6507715,650...    27   7.4  
08_02_0067 - 11863092-11863104,11863432-11863547,11863610-118639...    27   9.8  

>05_02_0090 +
           6507378-6507481,6507495-6507627,6507658-6507715,
           6508756-6508814,6509127-6509169,6509325-6509422,
           6509619-6509744
          Length = 206

 Score = 27.5 bits (58), Expect = 7.4
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = +1

Query: 268 LTHETIPKCMTEGCVIHLGFS 330
           L  + +P+C T+G  +HLG S
Sbjct: 26  LVWQLVPRCRTDGAAVHLGGS 46


>08_02_0067 -
           11863092-11863104,11863432-11863547,11863610-11863950,
           11864978-11865331,11866055-11866150,11866812-11866980,
           11867541-11867618,11867745-11867926,11868010-11868094,
           11868545-11868648,11869510-11869590,11870123-11870240,
           11871299-11871430,11871635-11871788,11871838-11871917
          Length = 700

 Score = 27.1 bits (57), Expect = 9.8
 Identities = 10/17 (58%), Positives = 12/17 (70%)
 Frame = +1

Query: 187 YKEEGTLKQPIDVRAEN 237
           Y E GTL  P+D+ AEN
Sbjct: 541 YHEAGTLGSPVDINAEN 557


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,906,105
Number of Sequences: 37544
Number of extensions: 277784
Number of successful extensions: 436
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 428
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 436
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1222086348
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)