Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--2282
(589 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated... 22 3.9
DQ011228-1|AAY63897.1| 486|Apis mellifera Amt-2-like protein pr... 22 5.1
DQ325133-1|ABD14147.1| 181|Apis mellifera complementary sex det... 21 6.8
DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex det... 21 6.8
DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex det... 21 6.8
DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex det... 21 6.8
DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex det... 21 6.8
DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex det... 21 6.8
DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex det... 21 6.8
DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex det... 21 6.8
DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex det... 21 6.8
AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex det... 21 6.8
AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex det... 21 6.8
DQ325083-1|ABD14097.1| 189|Apis mellifera complementary sex det... 21 9.0
>DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 391
Score = 22.2 bits (45), Expect = 3.9
Identities = 6/24 (25%), Positives = 15/24 (62%)
Frame = -1
Query: 364 YILL*CQYNMRILPVTLYICNLYM 293
+ ++ CQ ++ P+ + IC +Y+
Sbjct: 111 HAIIACQMEFQLYPMDIQICPIYI 134
>DQ011228-1|AAY63897.1| 486|Apis mellifera Amt-2-like protein
protein.
Length = 486
Score = 21.8 bits (44), Expect = 5.1
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = +1
Query: 436 LLWFYWQILCNKPV*SQISPMLHYRQTILIYSQL 537
LL F WQ++C V + +S +++ IL Y+ L
Sbjct: 394 LLNFGWQMICLIVVIALVSIIMYIAFIILQYAGL 427
>DQ325133-1|ABD14147.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 6.8
Identities = 8/19 (42%), Positives = 12/19 (63%)
Frame = -3
Query: 446 NHNNVQAYNFN*L*SNFDY 390
N+NN +N+N L N +Y
Sbjct: 97 NYNNYNKHNYNKLYYNINY 115
>DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 6.8
Identities = 8/19 (42%), Positives = 12/19 (63%)
Frame = -3
Query: 446 NHNNVQAYNFN*L*SNFDY 390
N+NN +N+N L N +Y
Sbjct: 97 NYNNYNKHNYNKLYYNINY 115
>DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 6.8
Identities = 8/19 (42%), Positives = 12/19 (63%)
Frame = -3
Query: 446 NHNNVQAYNFN*L*SNFDY 390
N+NN +N+N L N +Y
Sbjct: 97 NYNNYNKHNYNKLYYNINY 115
>DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 6.8
Identities = 8/19 (42%), Positives = 12/19 (63%)
Frame = -3
Query: 446 NHNNVQAYNFN*L*SNFDY 390
N+NN +N+N L N +Y
Sbjct: 97 NYNNYNKHNYNKLYYNINY 115
>DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 6.8
Identities = 8/19 (42%), Positives = 12/19 (63%)
Frame = -3
Query: 446 NHNNVQAYNFN*L*SNFDY 390
N+NN +N+N L N +Y
Sbjct: 97 NYNNYNKHNYNKLYYNINY 115
>DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 6.8
Identities = 8/19 (42%), Positives = 12/19 (63%)
Frame = -3
Query: 446 NHNNVQAYNFN*L*SNFDY 390
N+NN +N+N L N +Y
Sbjct: 97 NYNNYNKHNYNKLYYNINY 115
>DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 6.8
Identities = 8/19 (42%), Positives = 12/19 (63%)
Frame = -3
Query: 446 NHNNVQAYNFN*L*SNFDY 390
N+NN +N+N L N +Y
Sbjct: 97 NYNNYNKHNYNKLYYNINY 115
>DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 6.8
Identities = 8/19 (42%), Positives = 12/19 (63%)
Frame = -3
Query: 446 NHNNVQAYNFN*L*SNFDY 390
N+NN +N+N L N +Y
Sbjct: 97 NYNNYNKHNYNKLYYNINY 115
>DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 6.8
Identities = 8/19 (42%), Positives = 12/19 (63%)
Frame = -3
Query: 446 NHNNVQAYNFN*L*SNFDY 390
N+NN +N+N L N +Y
Sbjct: 97 NYNNYNKHNYNKLYYNINY 115
>AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 21.4 bits (43), Expect = 6.8
Identities = 8/19 (42%), Positives = 12/19 (63%)
Frame = -3
Query: 446 NHNNVQAYNFN*L*SNFDY 390
N+NN +N+N L N +Y
Sbjct: 330 NYNNYNKHNYNKLYYNINY 348
>AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 21.4 bits (43), Expect = 6.8
Identities = 8/19 (42%), Positives = 12/19 (63%)
Frame = -3
Query: 446 NHNNVQAYNFN*L*SNFDY 390
N+NN +N+N L N +Y
Sbjct: 330 NYNNYNKHNYNKLYYNINY 348
>DQ325083-1|ABD14097.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 21.0 bits (42), Expect = 9.0
Identities = 12/40 (30%), Positives = 15/40 (37%)
Frame = -3
Query: 446 NHNNVQAYNFN*L*SNFDYWRTTSNXXXXXXIMPVQHANF 327
N+NN YN N Y N +PV + NF
Sbjct: 99 NYNNKYNYNNNNYNKKLYYKNYIINIEQIPVPVPVYYGNF 138
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 141,069
Number of Sequences: 438
Number of extensions: 3068
Number of successful extensions: 15
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17115420
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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