Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--2279
         (466 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT015225-1|AAT94454.1| 1129|Drosophila melanogaster RE23320p pro...    27   9.4  
BT011079-1|AAR82745.1| 1100|Drosophila melanogaster SD01102p pro...    27   9.4  
AE014296-98|AAF47384.1|  941|Drosophila melanogaster CG1233-PA, ...    27   9.4  
AE014296-97|AAG22219.2| 1129|Drosophila melanogaster CG1233-PB, ...    27   9.4  

>BT015225-1|AAT94454.1| 1129|Drosophila melanogaster RE23320p
           protein.
          Length = 1129

 Score = 27.5 bits (58), Expect = 9.4
 Identities = 15/33 (45%), Positives = 18/33 (54%)
 Frame = +3

Query: 297 LRLSYSLYHQLPISESLVKIGPAVPEISRNKQT 395
           L L  SL HQ+  SE+L  +G  V E    KQT
Sbjct: 222 LSLHLSLDHQMEDSETLALMGRKVTEAQTKKQT 254


>BT011079-1|AAR82745.1| 1100|Drosophila melanogaster SD01102p
           protein.
          Length = 1100

 Score = 27.5 bits (58), Expect = 9.4
 Identities = 15/33 (45%), Positives = 18/33 (54%)
 Frame = +3

Query: 297 LRLSYSLYHQLPISESLVKIGPAVPEISRNKQT 395
           L L  SL HQ+  SE+L  +G  V E    KQT
Sbjct: 284 LSLHLSLDHQMEDSETLALMGRKVTEAQTKKQT 316


>AE014296-98|AAF47384.1|  941|Drosophila melanogaster CG1233-PA,
           isoform A protein.
          Length = 941

 Score = 27.5 bits (58), Expect = 9.4
 Identities = 15/33 (45%), Positives = 18/33 (54%)
 Frame = +3

Query: 297 LRLSYSLYHQLPISESLVKIGPAVPEISRNKQT 395
           L L  SL HQ+  SE+L  +G  V E    KQT
Sbjct: 34  LSLHLSLDHQMEDSETLALMGRKVTEAQTKKQT 66


>AE014296-97|AAG22219.2| 1129|Drosophila melanogaster CG1233-PB,
           isoform B protein.
          Length = 1129

 Score = 27.5 bits (58), Expect = 9.4
 Identities = 15/33 (45%), Positives = 18/33 (54%)
 Frame = +3

Query: 297 LRLSYSLYHQLPISESLVKIGPAVPEISRNKQT 395
           L L  SL HQ+  SE+L  +G  V E    KQT
Sbjct: 222 LSLHLSLDHQMEDSETLALMGRKVTEAQTKKQT 254


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,984,427
Number of Sequences: 53049
Number of extensions: 275698
Number of successful extensions: 531
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 524
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 531
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1559812275
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)