Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--2275
         (621 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY118990-1|AAM50850.1|  618|Drosophila melanogaster LP02703p pro...    30   2.2  
AE014296-859|AAF47909.1|  618|Drosophila melanogaster CG11349-PA...    30   2.2  

>AY118990-1|AAM50850.1|  618|Drosophila melanogaster LP02703p
           protein.
          Length = 618

 Score = 30.3 bits (65), Expect = 2.2
 Identities = 23/67 (34%), Positives = 30/67 (44%), Gaps = 1/67 (1%)
 Frame = +1

Query: 343 FNRFPEASNGRDACEGASVHERPGQGSRRP-AARPGLRQAGRRHLHDPRPGAARSDDRVT 519
           FN+ P A    D   GA +    G  ++RP AA PG     +R   DP  GA  +  +V 
Sbjct: 413 FNQRPSAQGAFDPSTGAQLGAGQGVPNQRPNAAGPGAFDPNQRQ-SDPSIGAQLAAGQVP 471

Query: 520 RGGARSQ 540
           R   R Q
Sbjct: 472 RLNNRRQ 478


>AE014296-859|AAF47909.1|  618|Drosophila melanogaster CG11349-PA
           protein.
          Length = 618

 Score = 30.3 bits (65), Expect = 2.2
 Identities = 23/67 (34%), Positives = 30/67 (44%), Gaps = 1/67 (1%)
 Frame = +1

Query: 343 FNRFPEASNGRDACEGASVHERPGQGSRRP-AARPGLRQAGRRHLHDPRPGAARSDDRVT 519
           FN+ P A    D   GA +    G  ++RP AA PG     +R   DP  GA  +  +V 
Sbjct: 413 FNQRPSAQGAFDPSTGAQLGAGQGVPNQRPNAAGPGAFDPNQRQ-SDPSIGAQLAAGQVP 471

Query: 520 RGGARSQ 540
           R   R Q
Sbjct: 472 RLNNRRQ 478


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,069,880
Number of Sequences: 53049
Number of extensions: 434451
Number of successful extensions: 1093
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1055
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1093
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2559155400
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)